Gene Sputcn32_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1942 
Symbol 
ID5078390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2228523 
End bp2229650 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content42% 
IMG OID640499103 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_001183464 
Protein GI146293040 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA GTGCCAATTT TGATGGTGGA AATATCCAAG TAGTCAATCT TGATAATAAA 
GATGATATTC AACTTGCGAT CCGCCCCGAT GCCGGTGGCG AGTTTTATCA ATGGTTTAAT
TTTCGATTTG AAGGTAGCGT TGGTCATCAA TACACGTTAA ATATCATTAA TGCAGGTACC
GCTTCTTATC CAAAAGGTTG GGAGAATTAT CAAGCTGTTG CCAGTTATGA TCGCCAGCAC
TGGTTTCGTG TGCCGACACA ATATCAAGAT GGCACATTAA CTATTCAACT TGAGTTAGAT
TGTGATGCAA TCCAACTAGC CTATTTTGCA CCTTACAGTT ACGAACGCCA CTTAGACTTA
CTCAGCAGTG CTCAATTGCA TCCTGATGTT AATTTAGAGC ATTTAGGCTT AACCTTAGAT
GGTCGAGATA TCACGCTTGT GAAAGTGGGT AATGCCCATC CTTCCAAGCG TAATATATGG
ATCACAGCCA GGCAGCATCC TGGCGAAACT ATGGCTGAAT GGCTAGTTGA AGGCTTAATT
AACCGTTTGC TTGATAATGA CTGCCCAACA GCAAAATCTC TGCTCGATAA AGCAAACTTT
TACATTGTGC CCAATATGAA CCCCGATGGT AGTGTTAGAG GGCATCTTCG TACCAATGCG
GTAGGTGTTA ATCTTAATCG CGAGTGGCAA AGCCCAAGTT TAGAAAAGAG TCCTGAGGTT
TATCATGTTG TAAATAAGAT GAAACAAATT GGCGTCGATT TATTTTACGA TGTGCATGGT
GATGAAGGTT TACCCTATGT ATTTCTTGCT GGCTGTGAAG GCGTACCGAC ATATAGCGAC
AGATTGGCAC AGTTACAGGC CGATTTTAGT CAAGCATTAA CTTTAGCCAG TGCTGATTTT
CAAACTCAAT TTGGTTATGC TAAAGACGAA CCGGGTCAGG CTAACTTAAC CGTGGCATCA
AATTGGGTAG CACAAACCTT TGAATGTTTA TCCAATACAC TTGAAATGCC ATTTAAAGAC
AATAATAACT TACCCGATCC TTTTGTTGGC TGGTCGCCAG AGCGTAGCAT TTATCTGGGT
GAAGCCTCGT TAATCGCCAT GCTGGCTGTT GTGGATAAAT TGAGATAA
 
Protein sequence
MRISANFDGG NIQVVNLDNK DDIQLAIRPD AGGEFYQWFN FRFEGSVGHQ YTLNIINAGT 
ASYPKGWENY QAVASYDRQH WFRVPTQYQD GTLTIQLELD CDAIQLAYFA PYSYERHLDL
LSSAQLHPDV NLEHLGLTLD GRDITLVKVG NAHPSKRNIW ITARQHPGET MAEWLVEGLI
NRLLDNDCPT AKSLLDKANF YIVPNMNPDG SVRGHLRTNA VGVNLNREWQ SPSLEKSPEV
YHVVNKMKQI GVDLFYDVHG DEGLPYVFLA GCEGVPTYSD RLAQLQADFS QALTLASADF
QTQFGYAKDE PGQANLTVAS NWVAQTFECL SNTLEMPFKD NNNLPDPFVG WSPERSIYLG
EASLIAMLAV VDKLR