Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1938 |
Symbol | ruvA |
ID | 5078386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2222374 |
End bp | 2222991 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499099 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_001183460 |
Protein GI | 146293036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00077844 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGTC GTTTACGTGG TGTGCTGGTT GAAAAACAAG CTCCTGAAAT ACTGATGGAT GTTAATGGTG TCGGTTATGA GTTACAGATG CCACTTACCA GCTTTTATGA GCTGCCAGAG ATCGATCACG AGACTGTGGT ATACACCCAT TTTGTTGTGC GTGAAGATGC TCAACTCCTT TATGGTTTTA TCACTAAGCA GGAGCGGGCA TTGTTCCGCT TACTGATCAA GACCAATGGT GTTGGTCCAA AACTCGCCTT AACCATTCTT TCTGGCATGA CGGCATCGGA GTTTGTTGGT TGTGTTGAGC GCGATGATAT CGTCACTTTA GTGAAGTTAC CGGGAGTGGG TAAGAAAACC GCCGAGCGTT TACTTGTCGA AATGCGCGAT AAGCTCAAGA GCTTGATGGA AGCATCTGCA GGCTCAGAGC GTGAGTTCGT GCTGCAATCC AATTATTCAC CCACACCTAC GGTGAATAGT GCCGAGGAGG ATGCCATTTC TGCTTTGATC TCTTTGGGTT ACAAACCACC ACAAGCGAGT AAATCGGTTT CTGCTGCTTA CAAAGAGGGC ATGGATTCAG AAACCTTGAT TAAAGCTGCA CTTAAGTCGA TGCTCTGA
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Protein sequence | MIGRLRGVLV EKQAPEILMD VNGVGYELQM PLTSFYELPE IDHETVVYTH FVVREDAQLL YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTASEFVG CVERDDIVTL VKLPGVGKKT AERLLVEMRD KLKSLMEASA GSEREFVLQS NYSPTPTVNS AEEDAISALI SLGYKPPQAS KSVSAAYKEG MDSETLIKAA LKSML
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