| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1935 |
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| Symbol | aspS |
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| ID | 5078555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2218988 |
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| End bp | 2220766 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499096 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001183457 |
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| Protein GI | 146293033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0176325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG
GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGCGTTG TCTTTTTAGA TTTAAGAGAC
AGAGAAGGTC TCGTCCAAGT GGTTTATGAT CCAGACTTGC CAGAGGTGTT TGCTGTGGCC
AGCACACTGC GTGCCGAGTT CTGTGTTCAG GTAAAAGGTG TGGTTCGCGC TCGTCCAGAT
AGCCAAGTTA ATGGTCAAAT GAAGACGGGT GAGATTGAAG TATTAGGTAA AGCATTGACG
ATTATCAACG CTGCCGATCC GTTGCCGCTG AGCCTAGATA ACTATCAGAA CAACAGCGAA
GAGCAACGTC TTAAGTATCG TTACTTAGAT TTACGTCGCC CAGAGATGGC GCAGCGTTTA
ATGTTCCGCG CTAAGGTCAC CAGTGCAGTG CGTCGTTTCC TCGACTCAAA CGGTTTTTTA
GATATAGAAA CCCCGATCCT AACCAAGGCT ACGCCAGAAG GTGCCCGCGA TTATTTAGTG
CCAAGCCGTA CTTATAAAGG CCAATTCTTC GCGCTGCCAC AATCACCACA GCTGTTTAAA
CAGCTGCTGA TGATGTCAGG TTTTGACCGT TACTATCAAA TCGTAAAATG CTTCCGTGAT
GAAGATTTAC GTGCTGACCG TCAACCAGAA TTCACCCAAA TCGATATCGA AACCTCATTT
ATGACGTCCG AGCAAGTGAT GGCGAAGACC GAAGAAATGA TGCGCGGCCT GTTCCTTGAA
ATGCTCAATG TCGATCTCGG CGAATTCCCG CGAATGACCT ATAACGAAGC CATGCGTCGT
TTCGGTTCAG ATAAGCCAGA TTTACGTAAT CCATTAGAGC TGGTGGACAT TGCAGATTTA
CTTAAAGAAG TGGAATTTGC GGTATTCTCA GCCCCTGCCA ACGATGAAGA AGGCCGTGTT
GCTGTACTGC GTATTCCAGG CGGCGCTGCA CTGTCTCGTA AGCAAATCGA TGATTATACT
AAGTTTGTTG GCATCTATGG TGCTAAAGGC TTAGCGTGGA TGAAGATTAA TGACCTAAGC
CTTGGCTTAG AGGGCATTCA ATCACCCGTG CTTAAGTTCT TAAACGAAAG CATAGTGAAT
GAAATCATTA GCCGCACAGG CGCGCAAACT GGCGACATTA TCTTATTTGG TGCAGATCAG
GCGACTGTGG TTGCCGAATC TATGGGTGCA CTGCGTCTTA AAGCCGGTGA AGATTTCAGC
TTATTGCAAG GTGAATGGCG TCCACTGTGG GTGGTTGACT TCCCGATGTT TGAGAAAATC
AACGGCAACT TCCATGCAGT TCACCATCCG TTCACCGCCC CGCGCGGCGT AACGGCGGCA
GAACTTGAAG CCAATCCAGC TAATCGCGTT TCCGATGCCT ATGATATGGT ATTGAACGGC
TGCGAATTAG GCGGTGGTTC AGTGCGTATT CACAACCAAG AAATGCAGTC TGCGGTATTC
CGTATTCTGG GTATTACCGA CGATGAAGCT AAAGAGAAGT TCGGCTTCCT GTTAGAAGCG
CTGCGTTATG GCACACCGCC ACATGCAGGT TTAGCCTTTG GTTTAGACCG CATCATTATG
CTGATGACGG GCGCAAGCTC AATCCGTGAT GTAATGGCGT TCCCGAAAAC CACTACTGCC
GCTTGTCCGC TGACTAACGC ACCAGGTTTT GCCAATCCGC AGCAGTTAGC TGAACTTGGC
ATTGCCGTTG TTGAGAAAGC TGTTAAAACA GAAGGCTAA
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| Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLPEVFAVA
STLRAEFCVQ VKGVVRARPD SQVNGQMKTG EIEVLGKALT IINAADPLPL SLDNYQNNSE
EQRLKYRYLD LRRPEMAQRL MFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDIADL
LKEVEFAVFS APANDEEGRV AVLRIPGGAA LSRKQIDDYT KFVGIYGAKG LAWMKINDLS
LGLEGIQSPV LKFLNESIVN EIISRTGAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFS
LLQGEWRPLW VVDFPMFEKI NGNFHAVHHP FTAPRGVTAA ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNQEMQSAVF RILGITDDEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVEKAVKT EG
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