| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1923 |
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| Symbol | |
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| ID | 5078543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2204250 |
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| End bp | 2206163 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499084 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001183445 |
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| Protein GI | 146293021 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCG CTCGCCCCGC GATTGTTTGG ACCATAGCCG GTTCAGACAG CGGCGGCGGT
GCCGGTATTC AGGCGGACTT GGCCACGATT CAAGATTTGG GTTGTCATGG TTGCAGCGTG
ATCACCACAG TGACGGCGCA AAGCTCAGTG GCGGTCACTT TAGTCGAGCC CGTGTCAGCT
GCGATGTTAA TGGCTCAGTT GACCACTTTA CTGTCAGACT TGCCACCCAA AGCAATCAAA
ATCGGCTTAC TGGCTGATCA ATCTCAAGTC GCATTATTGG CAGATTGGAT CGCGAGTTTT
AAAATCCACT ATCCATCTGT GCCTGTGATT GTCGATCCTG TGATGGTCGC CAGTTGTGGC
GATGCATTAG CAGTAGATAA CTGTCAGGAT ATAAAAAGTA CGGCCAAATC AGCCTTAGAT
TTTAATCCTT TCAAAGGCTT AATCGAACTT ATCACGCCCA ATGTGCTTGA ACTTGGGCGG
TTAACTCACA GTGATGTTCC AACGAAAGCA CAATTCGCTG CTGCAGCACA GGCTTTATCC
CAGAGTTTAG ATTGCAGTGT GCTCGCTAAA GGAGGCGATG TGAGCTTTGG TTGCACTGAT
ATTCTTGATG ATACTCATGC TAAAACTCAC GATAACACTC ATGCTCAAAC TCAGGCTAAC
GTTCATGTTA GCACTCTCGA TAGCAACGGC TGGGATCATG GGCTTGCCGA GGATTATCTG
GTTTGCCATC AAGTACGCGC GAGCTCTGAG CTACATCAAA ATGGGTGCTT CTGGTTAGCA
AGCCAGCGGG TTAATACCCG TCATAACCAT GGTAGCGGCT GCACTTTGTC ATCGGCTATT
GCCGCCGTGT TAGCGCAAGG TTTTGTATTG CAAGATGCGG TGGTGGTTGC CAAAGCCTAC
GTGAGTCAAG GCTTAAGCGC GGCGATTGGC TTAGGGCAAG GTCCAGGGCC GTTGGCCCGT
ACGGGGTGGC CCAATGACTT GTCCCGCTAT GCCAAGATAA GGCTGTGTGA TGGCAATTTT
ATTAGTCATA AACTCAATCA ACACCTTGAT ATTGTTAATG ATTTAGTTGA GACGGTTTTA
TCTGCAACAG ATCAGGCAAC CGCTCAGGTA GTAAGAATAG CCTCGACGCC AGCTCAATGC
ATCTCATCCC ACGGTTTTAA AATTCTCGAT GCCGATCTTG GTGTTTATCC CGTGGTGAGT
GACTTAACCA TGCTGGAGAG TTTGTTAGCT GCGGGTGTTA AAACCCTGCA GTTACGGATA
AAAACCGACA TCAGCGAGTT ATCTAGTGCA GCGCCAGCCG AATCTGATTT AGGCAAATGT
GAGTCAGGTA AGTCTGAGTT GGTTGGCTCT GAATTAGAAG CACAAATTCA AACGGCCATT
GCCTTAGGTA AGCATTTTAA TGCTCAGCTT TTTATCAATG ATCACTGGCA GTTAGCGATA
AAATACCATG CCTTTGGGGT ACATTTAGGC CAAGAAGATC TCGCCGTTAC CGACTTAGAG
GCCATTCAGT CGGCAGGGCT CGCATTAGGT ATATCCAGCC ACAGTTATTT TGAGTTGCTA
CTGGCGCATC AATACTCGCC ATCCTACATA GCGCTTGGGC ATATATTCCC AACCACGACG
AAGCAAATGC CTTCGGCGCC CCAAGGGCTC GCAAAACTTA AACACTATGT GGCGTTACTC
CAAGACCATT ATCCCTTGGT CGCCATTGGC GGCATCGATT TAGATAATCT GGCAAAGGTG
AAAGCCACGG GGGTGGGCAA TATTGCTGTG GTGCGCGCAA TAACCGAGGC TCAGGATCCA
GTCGCAGCGT TTGCACAGCT GAGCCAAGCT TGGGAGCAAT GCAGCTTGTC TGAAGAACTG
GCTGCAAAGC ATGAGTTTGA TGTAAAGCAT AAGTTGGATG CAAAATATGA GTAA
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| Protein sequence | MSTARPAIVW TIAGSDSGGG AGIQADLATI QDLGCHGCSV ITTVTAQSSV AVTLVEPVSA
AMLMAQLTTL LSDLPPKAIK IGLLADQSQV ALLADWIASF KIHYPSVPVI VDPVMVASCG
DALAVDNCQD IKSTAKSALD FNPFKGLIEL ITPNVLELGR LTHSDVPTKA QFAAAAQALS
QSLDCSVLAK GGDVSFGCTD ILDDTHAKTH DNTHAQTQAN VHVSTLDSNG WDHGLAEDYL
VCHQVRASSE LHQNGCFWLA SQRVNTRHNH GSGCTLSSAI AAVLAQGFVL QDAVVVAKAY
VSQGLSAAIG LGQGPGPLAR TGWPNDLSRY AKIRLCDGNF ISHKLNQHLD IVNDLVETVL
SATDQATAQV VRIASTPAQC ISSHGFKILD ADLGVYPVVS DLTMLESLLA AGVKTLQLRI
KTDISELSSA APAESDLGKC ESGKSELVGS ELEAQIQTAI ALGKHFNAQL FINDHWQLAI
KYHAFGVHLG QEDLAVTDLE AIQSAGLALG ISSHSYFELL LAHQYSPSYI ALGHIFPTTT
KQMPSAPQGL AKLKHYVALL QDHYPLVAIG GIDLDNLAKV KATGVGNIAV VRAITEAQDP
VAAFAQLSQA WEQCSLSEEL AAKHEFDVKH KLDAKYE
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