Gene Sputcn32_1919 details

Gene Information

• Locus tag: Sputcn32_1919
• ID: 5078539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2198919
• End bp: 2199413
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640499080
• Product: DTW domain-containing protein
• Protein accession: YP_001183441
• Protein GI: 146293017
• COG category: [S] Function unknown
• COG ID: [COG3148] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACAGTGC AAATTATTTT ACTTACCCAT GAGCGTGAAT TAGTACGAGC AAATAATACT 
GGACGGCTCG CTATAACGGC CTTTCCCGAA AGTGTTATCC GCATACCTTG GTCAAGAACT 
GCACCAGATC CAGCCTTAGT CGCTGCGTTA GCCTCTCAAG AGGCTAAGCT TTTATTTCCA 
GCGGCATCAG AGAAAAATCT CAAGCAAGAT ATGCTAATTA AGCCAGCATT AACACGACCA 
AAACAAATTG TGATCCTCGA TGGTACGTGG CAGGAGGCTC GAAAGATGCT ACGCCAAAGT 
TCGTATCTGA AATCGGCAGC AAGAATTGCA TTACCGTATA AGGAAAGTGG TTCCACTTTT 
GTATTAAGGC GCAATCAGCT AGAGGGCGGG CTTTGTACTG CGGAGTGTAT TATTGCCCTT 
TGGCAACAAG TGGGCTATGA AAATCAAGCC ACACAATTAA TGTCGCTATT TACCGCGCTC 
AATAACCTTA ATTGA 

 

Protein sequence

MTVQIILLTH ERELVRANNT GRLAITAFPE SVIRIPWSRT APDPALVAAL ASQEAKLLFP 
AASEKNLKQD MLIKPALTRP KQIVILDGTW QEARKMLRQS SYLKSAARIA LPYKESGSTF 
VLRRNQLEGG LCTAECIIAL WQQVGYENQA TQLMSLFTAL NNLN