Gene Sputcn32_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1918 
Symbol 
ID5078538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2198330 
End bp2198863 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content44% 
IMG OID640499079 
ProductNUDIX hydrolase 
Protein accessionYP_001183440 
Protein GI146293016 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTCC TTAAATCCAC CCAAGATCCT GCGGTAAATT TACTCACTGC GAGAGTTTTT 
CACCGCCGAG CAGCACGAGC CATAGTGCTA TCTGGTGATG ATATTCTCCT GCTCTATACT
CAAAAATACC ATGACTATAG CCTTCCTGGT GGTGGCATTG ATGAGGGAGA GAGTGTCGAA
GCTGGACTTA TCCGTGAATT GCGCGAAGAA ACGGGCGCTA TTGCGATTAA AGTCTTAGCT
CCCTTCGGCT GCTATGAAGA GTTTCGTCCA TGGTATCGTG AAAATGCAAA TGTTGTGCAT
ATGGAATCCT ATTGCTATCA ATGTGAAATT GATATCGACT TAGGCGTACG AGGATTAGGG
ACTCCTACCT TAGAAGCCCA TGAGATCAAA AATGGTATGC GACCTGAGTG GATTAATATC
CATCAGGCTA TTGCTCATAA TGAAGATGTG CGGCGTCATT CACCTCATAA AGGTCAATCG
ATAGAGCGCG AAACGTATTT ACTAAAACGG ATAGTGGAAG AGCTTTTAAA CTAA
 
Protein sequence
MRLLKSTQDP AVNLLTARVF HRRAARAIVL SGDDILLLYT QKYHDYSLPG GGIDEGESVE 
AGLIRELREE TGAIAIKVLA PFGCYEEFRP WYRENANVVH MESYCYQCEI DIDLGVRGLG
TPTLEAHEIK NGMRPEWINI HQAIAHNEDV RRHSPHKGQS IERETYLLKR IVEELLN