Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1918 |
Symbol | |
ID | 5078538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2198330 |
End bp | 2198863 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499079 |
Product | NUDIX hydrolase |
Protein accession | YP_001183440 |
Protein GI | 146293016 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTCC TTAAATCCAC CCAAGATCCT GCGGTAAATT TACTCACTGC GAGAGTTTTT CACCGCCGAG CAGCACGAGC CATAGTGCTA TCTGGTGATG ATATTCTCCT GCTCTATACT CAAAAATACC ATGACTATAG CCTTCCTGGT GGTGGCATTG ATGAGGGAGA GAGTGTCGAA GCTGGACTTA TCCGTGAATT GCGCGAAGAA ACGGGCGCTA TTGCGATTAA AGTCTTAGCT CCCTTCGGCT GCTATGAAGA GTTTCGTCCA TGGTATCGTG AAAATGCAAA TGTTGTGCAT ATGGAATCCT ATTGCTATCA ATGTGAAATT GATATCGACT TAGGCGTACG AGGATTAGGG ACTCCTACCT TAGAAGCCCA TGAGATCAAA AATGGTATGC GACCTGAGTG GATTAATATC CATCAGGCTA TTGCTCATAA TGAAGATGTG CGGCGTCATT CACCTCATAA AGGTCAATCG ATAGAGCGCG AAACGTATTT ACTAAAACGG ATAGTGGAAG AGCTTTTAAA CTAA
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Protein sequence | MRLLKSTQDP AVNLLTARVF HRRAARAIVL SGDDILLLYT QKYHDYSLPG GGIDEGESVE AGLIRELREE TGAIAIKVLA PFGCYEEFRP WYRENANVVH MESYCYQCEI DIDLGVRGLG TPTLEAHEIK NGMRPEWINI HQAIAHNEDV RRHSPHKGQS IERETYLLKR IVEELLN
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