| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1903 |
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| Symbol | |
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| ID | 5078523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2181230 |
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| End bp | 2183719 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499064 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001183425 |
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| Protein GI | 146293001 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAC GTGACTTTAT TAAAGCCAAT GCCGTCATTG CAGCCGCAGG TGCAGCAGGC
TTAGCCTTGC CCGCGGGTGC CAGCAACTTA ATTACCAGCT CAGAACAAAC AAAATTAGAG
TGGAATAAAG CCCCGTGCCG TTTTTGCGGT ACGGGTTGCT CCGTTATTGT GGCAACGCGC
GATGGCAAAG TGGTAGCAAC CCACGGTGAT GCCAATAGTG AAGTGAACCG AGGCCTTAAC
TGTATTAAAG GCTATTTCCT TTCAAAAATT ATGTATGGCA GTGACCGTTT AACCACGCCT
ATGCTGCGGA TGACTGATGG TAAATACGAT AAGCATGGTG AATTTACGCC CATTAGTTGG
GATAGCGCTT TCGATATCAT GGCGCAAAAA TGGAAAGAAA CCCTTAAAGC AAAAGGGCCA
ACGGCCGTTG GGATGTTTGG CTCTGGCCAA TGGACGATTT GGGAAGGTTA TGCCGCCGTT
AAATTAATGA AGGCGGGTTT TGGTTCAAAT AATATCGATC CTAATGCTCG TCACTGTATG
GCGTCAGCCG TGGTCGGTTT TATGCGTACC TTTGGTATCG ATGAACCTAT GGGATGCTAT
GACGATATGG AAGCTGCCGA TGCCTTTGTG CTATGGGGCT CAAATATGGC TGAAATGCAT
CCTATTCTGT GGAGCCGCGT CACCGATCGC CGCTTGAGTG CAAATCATGT CAAAGTTGCC
GTGCTGTCAA CCTTTGAACA TCGCTCCTTC GATCTGGCCG ATTTACCGAT AGTTTTTACC
CCACAAACTG ACTTAGCCAT TCTAAATTTT ATCGCTAACT ATATTATTCA AAACGATAAA
GTGAATTGGG ACTTTGTTAA AAAACATGTC AATTTCCGTG AGGGCACAAC GGACATTGGA
TATGGCTTAC GTCCAACCCA TCCACTTGAA CAAAAAGCAA AAAATGTCAA AACAGCAGGT
GATTCTACCC CCATTGATTT TGAGGCCTTC AAAGCCTTTG TTGCCGAATA TACGGTTGAA
AAAGTCAGTA AATTATCTGG TGTTTCAGAA GACAAATTAG TGGCGTTGGC AAAATTGTAT
GCTGATCCTA ATACGAAAGT AACGTCGTTC TGGACCATGG GGTTTAACCA ACATACTCGC
GGTGTGTGGT GTAATAACCT TATCTATAAC ATTCATTTAT TGACCGGAAA AATATCTACC
CCAGGAAATA GTCCGTTTTC ATTAACGGGG CAACCTTCAG CCTGTGGTAC TGCCCGTGAA
GTGGGTACTT TCTCCCATCG CCTACCTGCC GATATGGTGG TCACTAACCC TGAACACAGA
AAACATGCTG AAGAAATTTG GAAAATCCCA AGCGGCATTA TTCCACCCAA GCCGGGTTAC
CATGCAGTTG AACAAAACCG CCGCTTAAAA GATGGCGATT TGAACTGTTA CTGGGTGCAA
GTCAATAACA ATATGCAGGC AGCCCCCAAT ATCAATGAGG AAGGTTTACC TGGGTATCGT
AATCCTGCCA ACTTTATTGT GGTCTCCGAT GCTTACCCAA CGGTTACCAC CCAAGCTGCT
GATTTGATTT TGCCAACTGC GATGTGGGTC GAAAAAGAGG GCGCCTATGG TAATGCCGAA
CGCCGTACTC AGTTCTGGCA TCAAATGGTA CAAGCACCCG GTGAGTCCCA TTCGGATCTA
TGGCAACTGA TGGAATTTGC TAAGCGCTTT ACCACCGATG AAGTGTGGTC ACAGGAAGTG
CTGGCCGCAA ATCCCTCTTT CAAAGGGAAA ACCTTGTTTG AAGTGTTGTA CCAAAATGGC
AACGTCGACA AGTTCCCTCT AACAGATACC GATCCTAAGT TTTTGAACAA CGAAGCAAAA
CATTTTGGTT TTTATGTCCA AAAGGGATTA TTTGAAGAAT ACGCGACCTT TGGCCGCGGT
CATGGTCACG ACTTAGCCCC CTTCGAAGCT TACCATGAAG CCCATGGTTT ACGTTGGCCT
GTGGTCGATG GTAAAGAAAC CAAATGGCGC TTCCGTGAGG GAAGTGACCC CTATGTGAAA
GCGGGTAAAG GCTTTGAGTT TTATGGTCAT CCCGATGGGC GTGCCGTAAT TTTTGCACTG
CCCTATGAGC CACCAGCAGA GTCGCCAGAT GAAGAATACG ACATTTGGTT ATCGACAGGC
CGTGTTCTCG AGCATTGGCA TTCAGGGTCC ATGACGCAGC GTGTGCCTGA GCTTTACCGC
GCGTTCCCCG ATGCAGTTTG TTTTATGCAC CCAGATGATG CCAAAAAACG TGGTCTTCGC
CGCGGCGATG AAGTGAAAGT CGTATCACGT AGAGGTGAAA TTAAAACACG AGTCGAAACT
CGAGGTCGTA ACAAACCGCC AGTAGGCCTT GTGTTTGTAC CTTGGTTTGA TGCTAGCCAG
CTCATTAATA AAGTCACCTT AGATGCGACA GATCCTCTGT CAAAACAAAC TGACTTTAAA
AAATGTGCGG TGAAGATCGT TAAGGTATAA
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| Protein sequence | MNRRDFIKAN AVIAAAGAAG LALPAGASNL ITSSEQTKLE WNKAPCRFCG TGCSVIVATR
DGKVVATHGD ANSEVNRGLN CIKGYFLSKI MYGSDRLTTP MLRMTDGKYD KHGEFTPISW
DSAFDIMAQK WKETLKAKGP TAVGMFGSGQ WTIWEGYAAV KLMKAGFGSN NIDPNARHCM
ASAVVGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWSRVTDR RLSANHVKVA
VLSTFEHRSF DLADLPIVFT PQTDLAILNF IANYIIQNDK VNWDFVKKHV NFREGTTDIG
YGLRPTHPLE QKAKNVKTAG DSTPIDFEAF KAFVAEYTVE KVSKLSGVSE DKLVALAKLY
ADPNTKVTSF WTMGFNQHTR GVWCNNLIYN IHLLTGKIST PGNSPFSLTG QPSACGTARE
VGTFSHRLPA DMVVTNPEHR KHAEEIWKIP SGIIPPKPGY HAVEQNRRLK DGDLNCYWVQ
VNNNMQAAPN INEEGLPGYR NPANFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE
RRTQFWHQMV QAPGESHSDL WQLMEFAKRF TTDEVWSQEV LAANPSFKGK TLFEVLYQNG
NVDKFPLTDT DPKFLNNEAK HFGFYVQKGL FEEYATFGRG HGHDLAPFEA YHEAHGLRWP
VVDGKETKWR FREGSDPYVK AGKGFEFYGH PDGRAVIFAL PYEPPAESPD EEYDIWLSTG
RVLEHWHSGS MTQRVPELYR AFPDAVCFMH PDDAKKRGLR RGDEVKVVSR RGEIKTRVET
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPLSKQTDFK KCAVKIVKV
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