| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1900 |
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| Symbol | |
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| ID | 5078520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2176363 |
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| End bp | 2180244 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499061 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001183422 |
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| Protein GI | 146292998 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTTTGA ACTCTGATAA ACATCCGCTC TCGAACGCTT TCCTCAATCT TTGCTATCAG
AGCGACGCGT CGCGGATCCG ACGTCGCTTA TTTAAACTGA ATAAAGAAGC GGATTCCGAT
AAGAAGACGC ACCAATTAGC ACAGCTTACT GAGCAAGCTC AGACAGCCTT TGAAAAGGTT
GTGCAACGCC GTAACGCCCG TCCAAAAATT ACTTACCCAG AAAATCTTCC TGTATCGTTA
ATGCGCGATG AGATTGCCCG AGCCATAGCG GGTAATCAGG TGGTGATTAT TGCGGGTGAG
ACGGGTTCAG GTAAAACGAC TCAGTTACCT AAAATCTGTC TGGAATTAGG CTTAGGTTGC
CGTGGCATGA TAGGTCACAC ACAGCCGCGC CGTTTAGCTG CGCGCAGTGT CGCTAGCCGA
GTTGCCGAAG AGTTACAGAG TCCACTGGGT GAAGTGGTGG GCTTTAAGGT GCGTTTTGCC
GATGCTTTAA AAAGTGAGTC TTATATCAAA TTAATGACCG ACGGTATTTT ACTGGCGGAG
TTAACCTCGG ATCGCTATTT AGATCAATAC GATACTATCA TCATTGATGA AGCCCACGAA
CGTAGCCTCA ATATCGATTT TATCTTAGGT TATCTCAAGC AAATTCTGAA AAAGCGTCCA
GATTTAAAAG TCATCATTAC ATCGGCGACC ATTGACGTTG AGCGGTTCTC TAAACACTTT
AACAATGCAC CTATTATCGA GGTATCGGGT CGAACGTTTC CTGTCGAAAC CCGTTATCGC
CCGCTTGTTC AAGATACGGA TGCCGATCTG GATCAGATCG AAGGCATTTT TGCGGCGGTC
GATGAACTCG TCGCCGAAGG ACTTGGCGAT ATACTGATTT TTATGAACGG CGAGCGGGAA
ATACGCGACA CCGCGGAGCA ATTAAGCCGT CGTAATTACC GTGATACAGA GATTTTGCCA
CTTTACGCTC GCCTATCCTA TGGCGAACAA TCCAAAGTGT TTCATAGCCA CCGAGGCAGG
CGGATTGTGC TCGCCACCAA TGTGGCGGAA ACTTCATTGA CTGTACCCGG CATTCGTTAT
GTGATTGATC CTGGTACGGC GCGTATCAGC CGTTATAGCT ATCGTACCAA GGTGCAGCGC
CTGCCGATTG AACCTATTTC ACAGGCGAGT GCTAATCAAC GTCAAGGACG TTGTGGCCGA
GTGGGGCCAG GGATTTGTAT TCGTTTATAC GATGAGGCAG ATTTTAATAA TCGTCCGGCG
TTTACCGATC CTGAAATTTT GCGCACTAAC TTAGCCTCGG TGATTTTGCA GATGCTCGCG
ATTGGTCTTG GTGATATTGG GGCGTTTCCC TTTATTGAGC CACCCGATCC ACGTCATATC
CGAGATGGTT TTTTATTGCT TGAGGAATTA CAAGCCGTTA AGCATCAACA TGGTAAATTA
GTGTTAACAC CACTCGGACG ACAACTTGCA CAGATCCCGG TCGATCCGCG CTTAGCAAGA
ATGGTGGTTG AAAGTCACCA ACTGGGCTGC TTAAACGAAG TGTTAGTGAT TGCGGCCGGT
TTATCGATTC AAGATCCCCG CGAGCGGCCT ATGGATAAGA AGCAAGCGAG CGATGAAGCC
CATCGCCGTT TTGCCGATCC ACATTCTGAT TTTGTCAGTT GGATAAATTT GTGGCAGCAC
TTAAAAGATC AACAAAAAGA ACTCTCTGCC AGCCAGTTCC GCAAAAAATG CCGTGATGAA
TACTTAGCCT ACCTGCGAGT GCGTGAATGG CAGGATTTAT ATACTCAGCT TAAGCAAGCC
GTGCACGATT TAAAGTGGCG TTTAAACGAT ACGCCAGCCA CTTACGATAC CTTGCACCGT
GCGCTCTTGT CGGGCTTATT GAGCCATGTG GGTTTTAAAG ATAATAATAA CGAGTACTTA
GGTGCCCGTA ATCGCAAGTT TTTTGTATTC CCTGGTTCAC CACTGGCCAA AAAAGGCCCT
AAATGGATTA TGGCGGCTGA GCTTACCGAA ACCTCGCGCC TATTCGCCCG TTGCTGCGCC
AAAATTGAGC CAGAATGGCT TGAGCCCTTA GCCGCACATT TGATTAAGAA AAGCTATGTA
GAGCCGCATT TTGAAGCAAA ACCCGGCAGC GTTATCGCCC TTGAGAATCA AGTGCTCTAT
GGTTTGACCA TAGTACACAG ACGTAAGGTA CAGTACGGCC CCATAGATCC CGTTGAAGCA
CGCGAGATTT TCATCCGCAG CGCTTTGGCA GAAGGGCAAC TCCAAACCCA AGAAGCATTT
TTTGTCGCAA ATCAAAAACT GCTCGAAGAT ATCGAATCCT TAGAGCATAA ATCCCGCCGT
CGCGATATTT TAGTCGACGA GCAAGTCTTG ATGGATTTTT ATGAGCCGCG CATTCCACAG
GGCATTTACA ATGCTCAGCT ATTTTTTGGC TGGTGGAAAA AGGCTAAACG CGAGCAGCCA
GATTTACTCG ATTTTAACAA AGCGCTGTTG ATGCAACGCA GTGCGGATCA TATCTCGGCA
TTGGATTTCC CTGATACTTG GCACAAAGGC AATTTACGCC TCAAACTCAG TTATCACTTT
GAGCCCAGTG CCGCGGACGA TGGGGTGTCA GTGCACATTC CCGTGGCGTT ACTCAATCAA
ATCGATGAAA TGGATTTTGA CTGGTTGGTG GCGGGGCTCA GGGAAGAAAA ATGTATTGCG
TTGATTAAAT CCTTACCTAA GAGTTTGCGG CGTAATTTTG TGCCGGCACC TGATTATGCC
CGTGCTTGTG TGCAGGCTAT GGTGCCCTTT AGTGCCAGTT TGCTTGAGGC CATGTGCAAG
CAGTTATTGC GTATGAGTGG CACACGTGTG AATCCCGAAG ATTTTGATTT AACGCAGATC
CCACTGCATT TACAAATGAA TTTTAAAATC GAAGACGATA AACATAAGCT CATTGCCGAG
GGGCGAGTGC TCGATACCTT AAAAGCAGAG CTGCAAGGCG TAGTCGCTAA GGCCATTCGT
CAAGTTGCAG ATAAAGGCAT AGAAAAAGAA GCGCTGACAG AGTGGTCATT TGGTGAGTTA
CCCAAACAGT ATCAACAGCA GAAAGGTAAC TATCAAGTAC GGGCATTTCC AGCGCTCATC
GATAATAAAG ACAGTGTTGC AATCAAATTA TTCGATGATG AATTAGAGGC CCAAGATGCA
CACCGTCAGG GCTTACGGCG TTTACTGCTG CTTAATATTC CATCGCCAGT GAAACATTTG
CAGCAAGCCT TGCCCAATAA GGCCAAATTA GCCATGTATT TCAATCCATT TGGCCAAGTG
CAAATCTTGA TTGACGATAT TATTGCCGCT GCAGTACAGC AGTTGTTGGA TGAAAAGGCC
CTCGATGTGC GTGATCAACT GCAATTTGAG CAGGCAAAAG ACTGGGTTCG CCAAGAACTT
AATCCTACTG CCGAACAAAT CGCCTTGAAG GTTGAGCAGA TTTTGACCCT ATATCAGGGC
ATTAAAAAGC GCCTTAAGGG CAAAATTAGC CTAGATATTG CTTTTGCTAT GAGTGATATT
CAAAGCCAAT TAGACAAGTT AGTCTTTAAG GGATTTGTCG AAGCTTGTGG TTGGAGCCGT
CTAGGCGATG TGGCGCGGTA TTTAAAAGCC ATTGAGATAC GTATCGATAA ATTACCCGTC
GATCCGACCC GCGACCGTTT GCATATGCAA AGTATCAACA AAGTACAAGA GATCTTAGCG
GCGCAGTTAG CTAAGGTGCC GCGATCTGTG CCAACGCCAC AGACATTAAT CGAGGCGAGA
TGGATGATTG AGGAATATCG AGTGTCCTGT TTTGCGCAGG TGTTAGGTAC TGCCTATCCC
ATCTCTGAAA AACGGATTTT GAATCATATT CAACAGGGTT AA
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| Protein sequence | MVLNSDKHPL SNAFLNLCYQ SDASRIRRRL FKLNKEADSD KKTHQLAQLT EQAQTAFEKV
VQRRNARPKI TYPENLPVSL MRDEIARAIA GNQVVIIAGE TGSGKTTQLP KICLELGLGC
RGMIGHTQPR RLAARSVASR VAEELQSPLG EVVGFKVRFA DALKSESYIK LMTDGILLAE
LTSDRYLDQY DTIIIDEAHE RSLNIDFILG YLKQILKKRP DLKVIITSAT IDVERFSKHF
NNAPIIEVSG RTFPVETRYR PLVQDTDADL DQIEGIFAAV DELVAEGLGD ILIFMNGERE
IRDTAEQLSR RNYRDTEILP LYARLSYGEQ SKVFHSHRGR RIVLATNVAE TSLTVPGIRY
VIDPGTARIS RYSYRTKVQR LPIEPISQAS ANQRQGRCGR VGPGICIRLY DEADFNNRPA
FTDPEILRTN LASVILQMLA IGLGDIGAFP FIEPPDPRHI RDGFLLLEEL QAVKHQHGKL
VLTPLGRQLA QIPVDPRLAR MVVESHQLGC LNEVLVIAAG LSIQDPRERP MDKKQASDEA
HRRFADPHSD FVSWINLWQH LKDQQKELSA SQFRKKCRDE YLAYLRVREW QDLYTQLKQA
VHDLKWRLND TPATYDTLHR ALLSGLLSHV GFKDNNNEYL GARNRKFFVF PGSPLAKKGP
KWIMAAELTE TSRLFARCCA KIEPEWLEPL AAHLIKKSYV EPHFEAKPGS VIALENQVLY
GLTIVHRRKV QYGPIDPVEA REIFIRSALA EGQLQTQEAF FVANQKLLED IESLEHKSRR
RDILVDEQVL MDFYEPRIPQ GIYNAQLFFG WWKKAKREQP DLLDFNKALL MQRSADHISA
LDFPDTWHKG NLRLKLSYHF EPSAADDGVS VHIPVALLNQ IDEMDFDWLV AGLREEKCIA
LIKSLPKSLR RNFVPAPDYA RACVQAMVPF SASLLEAMCK QLLRMSGTRV NPEDFDLTQI
PLHLQMNFKI EDDKHKLIAE GRVLDTLKAE LQGVVAKAIR QVADKGIEKE ALTEWSFGEL
PKQYQQQKGN YQVRAFPALI DNKDSVAIKL FDDELEAQDA HRQGLRRLLL LNIPSPVKHL
QQALPNKAKL AMYFNPFGQV QILIDDIIAA AVQQLLDEKA LDVRDQLQFE QAKDWVRQEL
NPTAEQIALK VEQILTLYQG IKKRLKGKIS LDIAFAMSDI QSQLDKLVFK GFVEACGWSR
LGDVARYLKA IEIRIDKLPV DPTRDRLHMQ SINKVQEILA AQLAKVPRSV PTPQTLIEAR
WMIEEYRVSC FAQVLGTAYP ISEKRILNHI QQG
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