| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1899 |
|---|
| Symbol | |
|---|
| ID | 5078519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2175852 |
|---|
| End bp | 2176268 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499060 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001183421 |
|---|
| Protein GI | 146292997 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.288112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCAA TAAAAATCCG CGATCATATG GACCGTCAAC CCGTGTTACT CCGTGCTGAT
ATGTCGCTTG CTACTGCTGT CGAAAAACTA TTAGAAAATC ATAAAATGGG CGCCGCAGTG
GTCGATGATA ATGGCAATCT GGTGGGTTTT TTATCTCAAC AAGACTGCCT CGCCGTGATG
CTTAAGAGCA CTTACCATTG TGATATGACA TCCGTTGTAA AGGATTGCAT GCGTACTGAG
GTTTTGTTTG TCGGGCCAGA TGACAGCATC TTACAGCTTG CAGAGCAGAT GTTGGGAGCT
AAACCTAAAA CTTACCCTGT AGTAGATCAG GGTAAAGTGA TAGGCACTAT CAATCGTACA
AATGTGTTAA AGGCAATGAA CGTCTATATG CAGCAATGTT ACTTGGCACC GGCCTGA
|
|---|
| Protein sequence | MDSIKIRDHM DRQPVLLRAD MSLATAVEKL LENHKMGAAV VDDNGNLVGF LSQQDCLAVM
LKSTYHCDMT SVVKDCMRTE VLFVGPDDSI LQLAEQMLGA KPKTYPVVDQ GKVIGTINRT
NVLKAMNVYM QQCYLAPA
|
|---|
| |