| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1897 |
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| Symbol | |
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| ID | 5078517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2172724 |
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| End bp | 2174589 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499058 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001183419 |
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| Protein GI | 146292995 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.953875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCATA AAGTGCAGCG ATTCTTGCAA ATCACCTCAT TATCTTTTCG TCTTTATTTG
CTTGTTGGCC TGAGTCTAGT GGCATCAGTA GCGACTGCCG ACAATTTTTT GAAATTATCT
GTCTCTGGTG TTGATGAAGC ACTGCAACGT AATATCCTGG CGCATTTAGG CTCTTTACCT
GACTCAGATG TCCAACGCCG AGCCTTTTTA TTTAATGTCG AGGACAATGT CACTACAGCC
TTAGAATCCA TGGGGTATTA CCATGGAAAA ATTGAAGAAA AGCTGATTGA AAACGAAAAA
GGCCCATGGG AACTAAAACT GACAGTGTCT GCGGGAGAAC CCACTAAGAT TCAGTGGGTA
GATATCAATT TTTCAGGTGA AATGCTTAAT GATCGCGCTT TCGATCAATG GTTATCTCAA
GTCAATATCA AACCCGGCGA TACCTTAAAT CACGGTCATT ACTCTGAATT AAAGTCCCAA
CTTGTTGCCC TCGCCCTCGC CAGAGGATAT TTTGATGGCG AGTTCACACA ATCACAAATT
AAGATCAATC GCGATATTAA TACCGCTCAA ATCAGCCTAC ATTTCAATTC AGGCCAGCGC
TATCGTTTTG GACAAGTGAG TTTTGATGGG CATACGTTAG AACCGGATAT TTTAACTAAT
CTCATTCCCT TTAAAGAAAA TGCCTCCTAT TCGACTCGTC GGGTCAGTTC CCTCAATCGC
CAATTACTGG ACACGGGCTA CTTCGCCAAT ATAAAAGTAA TCCCACAAAT TGATTTAGTT
GAGGATAACC ATATCCCTGT TAAGGTTGAG TTAACGCCTA AGGCAAGCCA CTCAATTGAA
CTGGGTCTGG GGGGAGATAT AGGCCAGAGT GCAGATAATA CTTTTGACCC AAGGGTTCGA
GTCACTTGGC GTACTCCACA GATTAACAAG TATGGTCATT CCCAAGAAAC CAGTTTGGAA
TGGTCACCCG ATCGTCCTAA GTTTTTAACC ACCTACACCA TTCCGCTCAC ACATCCCTTG
GATGATCAAC TTAAAATCCG CTTAGGATTA TTGCGTGACA AATATGGTGT TACCCAAATT
TATGAGCCAG AGAATCGAGA TTTTCGCAAT ACAGGCCAAC TTGAATCAAC GAAATATTTA
CTTGGATTGC TTCGTCAACA ACGGCTTGAT AATCAATGGT TAATGAGTTA CTCACTCGAT
GCTATTCGTG AGGAATATAA TCAATCAGAC ACTGATTATT TTCCCACTTT CTATCTCGCT
GGAATTAACT TTTCTAAAAC AACCCGAGGA GATAACTCTC TCGATCCTAA ATCGGGTTTT
AGGCAAATCT ATAGTCTCGA CTATGCCGAT CCTTATTTAG GTTCTGAGAC TCGTTTAGCA
CGACTACAAG CCAAATTTAA ATGGATTGAT ACCTTCTTTG ATAACCACAG AGTCGTTGCA
CGTATCGATT TAGCGGCGAA CATTGCCAAT GAAAATGAAC TGGCTTTTAT TCCGCCCTCA
CTTCGTTACT TTGCAGGTGG CGATCAAACC GTACGCGGCT ACGGGTATCA AGAACTCGGC
CCTTATTTAG ATTATATCGA TACTGATGGT AGTACGAATC GGGAAGTTAT TGGTGGCCGT
TATTTAATGG TCGGCAGTTT AGAATACCAA TATTACCTCA CGCCCACTTG GCGGCTCGGC
ACCTTTATCG ATGCGGGAAA CGCCTTTGAT AATAATCAGT TTGAACCTGT TGTTTCTGTC
GGTGGTGGTA TTCACTGGAT ATCTCCTATT GGCCCAATAA AATTAGATTT AGGAATAGGC
TTGAAAGAAA CTGATACCAT TGAAAGGTCA TGGCGGATCC ACTTAACCAT GGGGACTGAG
CTATGA
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| Protein sequence | MEHKVQRFLQ ITSLSFRLYL LVGLSLVASV ATADNFLKLS VSGVDEALQR NILAHLGSLP
DSDVQRRAFL FNVEDNVTTA LESMGYYHGK IEEKLIENEK GPWELKLTVS AGEPTKIQWV
DINFSGEMLN DRAFDQWLSQ VNIKPGDTLN HGHYSELKSQ LVALALARGY FDGEFTQSQI
KINRDINTAQ ISLHFNSGQR YRFGQVSFDG HTLEPDILTN LIPFKENASY STRRVSSLNR
QLLDTGYFAN IKVIPQIDLV EDNHIPVKVE LTPKASHSIE LGLGGDIGQS ADNTFDPRVR
VTWRTPQINK YGHSQETSLE WSPDRPKFLT TYTIPLTHPL DDQLKIRLGL LRDKYGVTQI
YEPENRDFRN TGQLESTKYL LGLLRQQRLD NQWLMSYSLD AIREEYNQSD TDYFPTFYLA
GINFSKTTRG DNSLDPKSGF RQIYSLDYAD PYLGSETRLA RLQAKFKWID TFFDNHRVVA
RIDLAANIAN ENELAFIPPS LRYFAGGDQT VRGYGYQELG PYLDYIDTDG STNREVIGGR
YLMVGSLEYQ YYLTPTWRLG TFIDAGNAFD NNQFEPVVSV GGGIHWISPI GPIKLDLGIG
LKETDTIERS WRIHLTMGTE L
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