| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1886 |
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| Symbol | |
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| ID | 5080197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2156299 |
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| End bp | 2157276 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499044 |
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| Product | transketolase, central region |
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| Protein accession | YP_001183408 |
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| Protein GI | 146292984 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCGATTGC CATGCAAGCC
GATGAACGCA TGGTGGTTTT TGGTGAAGAT GTGGGCCACT TTGGCGGGGT ATTTCGCGCC
ACCTCTGGTC TTCAAGAAAA ATTCGGTCGC GCTCGCTGCT TTAATACCCC GCTGACAGAG
CAAGGTATTG CGGGTTTTGC CAATGGTTTA GCCTCAAATG GCATGACCGC CGTGGCTGAA
ATTCAATTCG CTGATTATAT TTTTCCGGCG TTTGATCAAA TCGTCAACGA GTCGGCTAAG
TTCCGTTACC GTAGCGGTAA TGAATTCGAT GTCGGTGGAT TAGTGTTCCG TACGCCCTAT
GGCGGCGGCA TTGCGGGTGG CCATTATCAC TCGCAATCAC CTGAAGCCTA TTTTACCCAG
ACGCCGGGAT TAAAAGTGGT GGTGCCACGC AACCCTGAGC AAGCCAAAGG CCTGCTGTTG
GCGTCAATCC GTGACAAAAA CCCGGTGATC TTCTTTGAGC CTAAGCGTTT ATATCGCGCA
TCGGTTGGCG AAGTGCCCGT GGGCGATTAT GAAATTGAAC TGGGTAAGGC TGAAGTGGTT
CGCGAAGGTA AAGACATCAC CTTAGTGGCG TGGGGCGCGC AAATGGAAAT CCTTGAAAAA
GCCGCCGATA TGGCCGCTAA AGAAGGGATC TCCTGTGAAG TTATCGATTT ACGCACCTTG
TCACCCTGGG ATATCGATAC CGTTGCCGAT TCTGTCAAAA AGACCGGACG TTTACTGGTT
AACCATGAAG CGCCATTAAC TGGTGGTTTT GCTGGTGAGA TAGCAGCGAC GATCCAACAA
GAATGCTTCT TGTATCTAGA GTCGCCCATT AGCCGAGTGT GTGGTTTAGA TACCCCGTAT
CCACTCGTCC ATGAAAAAGA ATATATGCCC GATGCGCTTA AGACCTTTGA AGCCATCAAA
GCATCAGTGA CCTTCTAG
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| Protein sequence | MAEMNMLQAV NEALSIAMQA DERMVVFGED VGHFGGVFRA TSGLQEKFGR ARCFNTPLTE
QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFD VGGLVFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPEQAKGLLL ASIRDKNPVI FFEPKRLYRA
SVGEVPVGDY EIELGKAEVV REGKDITLVA WGAQMEILEK AADMAAKEGI SCEVIDLRTL
SPWDIDTVAD SVKKTGRLLV NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY
PLVHEKEYMP DALKTFEAIK ASVTF
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