Gene Sputcn32_1868 details

Gene Information

• Locus tag: Sputcn32_1868
• ID: 5080179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2137125
• End bp: 2138966
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640499026
• Product: phosphogluconate dehydratase
• Protein accession: YP_001183390
• Protein GI: 146292966
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACTCAG TAGAAATACA CTCGGTAGTT CAAGCTGTTA CCGACAGAAT TATTGCCCGT 
AGCAAAGCGT CACGTGCAGG TTATTTAGCC GCATTGAATG ATGCCCGTCA TCATGGCGTA 
CACCGTAGCT CATTGAGCTG TGGCAACTTA GCCCATGGTT TTGCTGCCTG CAAACCAGAC 
GACAAAAATG CATTACGTCA ATTGAATAAG GCGAACATCG GCATAGTGAC GGCATTTAAC 
GATATGTTAT CTGCCCACCA ACCCTATGAA AGCTATCCTG AATTGCTTAA AAAAGCCTGT 
CAGGAAGTCG GCAGTGTTGC ACAAGTGGCG GGCGGTGTGC CGGCCATGTG TGATGGTGTG 
ACTCAGGGGC AACCCGGTAT GGAGTTGAGC CTGCTGAGCC GCGAAGTGAT AGCGATGGCA 
ACGGCTGTGG GCTTGTCTCA CAACATGTTT GATGGTGCTT TACTGCTCGG CATTTGCGAT 
AAAATCGTTC CAGGCTTGCT TATCGGTGCG CTCAGCTTTG GTCACTTACC TATGTTATTC 
GTGCCCGCAG GGCCGATGAA ATCAGGTATC CCGAACAAAG AAAAAGCCCG TATTCGTCAG 
CAATTTGCTC AAGGTAAAGT GGATCGCGCA CAACTGTTAG AAGCCGAAGC CCAGTCTTAC 
CACAGTGCAG GAACCTGTAC TTTCTACGGT ACTGCAAACT CGAATCAGCT GATGCTTGAA 
GTGATGGGGC TGCAGTTACC AGGCTCGTCA TTTGTTAATC CTGATGATCC ACTGCGCGAA 
GCCTTAAACA AGATGGCGGC TAAGCAAGTG TGTCGTTTAA CCGAAATGGG CACCCAATAT 
ACCCCAATCG GTGAAGTGGT CAGCGAAAAG TCTGTGGTTA ACGGCATTGT GGCGCTCTTG 
GCTACTGGCG GTTCTACGAA CTTGACCATG CACATCGTCG CCGCGGCTCG TGCTGCCGGT 
ATTATCGTGA ACTGGGATGA TTTTTCTGAA TTATCCGATG CCGTGCCATT AGTGGCGCGC 
GTGTATCCCA ACGGTCATGC CGACATTAAC CATTTCCACG CCGCCGGTGG TATGGCGTAC 
TTAATCAAAG AATTACTCGA TGCGGGTCTA TTGCATGAAG ATGTAAATAC CGTTGCAGGC 
TTTGGTTTAC GCCGTTATAC CCAAGAGCCT AGACTGCTCG ACGGTGAACT ATGCTGGGTC 
GATGGTCCAA CGACTAGCTT AGATACTGAA GTGTTAACGT CAGTCGCATC ACCTTTCCAA 
GGCAACGGTG GCTTGAAATT ACTCAAAGGT AACTTAGGTC GCGCTGTGAT CAAAGTGTCA 
GCGGTACAAG AACAACATCG TGTCGTTGAA GCGCCCGCGG TGGTGATTGA CGATCAAAAC 
AAACTCGATG CTTTATTCAA AGCGGGCGCT TTGGATAGAG ATTGTGTTGT GGTGGTTAAA 
GGTCAAGGCC CGAAAGCCAA CGGTATGCCT GAACTGCACA AGTTAACCCC ATTATTGGGA 
ACGCTTCAGG ACAAAGGCTT TAAAGTCGCA CTGTTGACTG ACGGTCGTAT GTCTGGTGCG 
TCGGGTAAAG TCCCTGCGGC CATTCATTTA ACGCCAGAAG CCTTAGATGG CGGCTTAATT 
GCCAAAGTCC AAGATGGCGA CTTGATCCGT GTCGATGCGT TAACAGGCGA ACTGAGCCTG 
CTGGTGTCAG AGACTGAACT TGCCACCAGA GCCGCGGGAA TAGTGGATTT ACATCGTTCA 
CGTTATGGTA TGGGTCGCGA GTTATTCAGT GCGCTACGCT CAAATCTCAG CAGTCCAGAA 
ACAGGTGCGC GTTGTACTAA TGCCATCGAT GAACTTTATT AA 

 

Protein sequence

MHSVEIHSVV QAVTDRIIAR SKASRAGYLA ALNDARHHGV HRSSLSCGNL AHGFAACKPD 
DKNALRQLNK ANIGIVTAFN DMLSAHQPYE SYPELLKKAC QEVGSVAQVA GGVPAMCDGV 
TQGQPGMELS LLSREVIAMA TAVGLSHNMF DGALLLGICD KIVPGLLIGA LSFGHLPMLF 
VPAGPMKSGI PNKEKARIRQ QFAQGKVDRA QLLEAEAQSY HSAGTCTFYG TANSNQLMLE 
VMGLQLPGSS FVNPDDPLRE ALNKMAAKQV CRLTEMGTQY TPIGEVVSEK SVVNGIVALL 
ATGGSTNLTM HIVAAARAAG IIVNWDDFSE LSDAVPLVAR VYPNGHADIN HFHAAGGMAY 
LIKELLDAGL LHEDVNTVAG FGLRRYTQEP RLLDGELCWV DGPTTSLDTE VLTSVASPFQ 
GNGGLKLLKG NLGRAVIKVS AVQEQHRVVE APAVVIDDQN KLDALFKAGA LDRDCVVVVK 
GQGPKANGMP ELHKLTPLLG TLQDKGFKVA LLTDGRMSGA SGKVPAAIHL TPEALDGGLI 
AKVQDGDLIR VDALTGELSL LVSETELATR AAGIVDLHRS RYGMGRELFS ALRSNLSSPE 
TGARCTNAID ELY