Gene Sputcn32_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1867 
Symbol 
ID5080178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2136417 
End bp2137115 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640499025 
Product6-phosphogluconolactonase 
Protein accessionYP_001183389 
Protein GI146292965 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG AAACCGTATT CAAATCATTC GACACACCAA GTGCGTTAGA GCAACAGCTT 
GCAAACAAAA TTGCAAGTCA GCTACAGGAA GCCGTCGATG CCCGCGGAAA AGCGAGCTTA
GTGGTTTCCG GTGGTTCAAC GCCGCTTAAG TTATTTCAAC TATTGAGTAT GAAGTCCATC
GATTGGAGTG ATGTTTATAT CACGCTTGCC GATGAGCGCT GGGTTGATGT GGAAGATCAT
GCATCAAATG AGCGTCTTGT GCGTGAACAT TTGTTACAAC ATCGTGCAGC CAATGCTAAA
TTCCGCGGTT TAAAAAATAT GTTTTCGACC GCAGAAGCGG GCGCCGATAT GGCCGCCGAG
TCCTTGTCTA ATTTCCCACG TCCTTTTGAT GTGGTGGTGT TAGGCATGGG GAATGATGGT
CATACTTGTT CTTGGTTTCC CTGTAGTGCT GAGCTTGAAC ATGCGCTCAC AACCCAAGAC
CTGTGCGTGG CGACGAACCC CACCACAGCT CCCCATGGCA GAATTACGCT CTCTAAGAGT
GCGATTCTGA ACAGCAGACA AATTTATCTG CACTTGGTCG GGGAACAGAA ATTATCCGTA
TATCGTCAAG CGTTAGAAAG TGATGATGTC CATGCTATGC CTATCAGAGC CGTATTAGCG
CAGCGTAAAA CGCCCGTTGA TGTGTTCTGG AGCGCTTAA
 
Protein sequence
MIKETVFKSF DTPSALEQQL ANKIASQLQE AVDARGKASL VVSGGSTPLK LFQLLSMKSI 
DWSDVYITLA DERWVDVEDH ASNERLVREH LLQHRAANAK FRGLKNMFST AEAGADMAAE
SLSNFPRPFD VVVLGMGNDG HTCSWFPCSA ELEHALTTQD LCVATNPTTA PHGRITLSKS
AILNSRQIYL HLVGEQKLSV YRQALESDDV HAMPIRAVLA QRKTPVDVFW SA