Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1859 |
Symbol | |
ID | 5080170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2126953 |
End bp | 2127444 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499017 |
Product | SecC motif-containing protein |
Protein accession | YP_001183381 |
Protein GI | 146292957 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATGA GCCCAGAATA TATCTGCCCA TGTGGTACGG GGAAATACTA TCGAGACTGC TGCGAGCCAC TGCACCTTGA TAGCACTTTC GCCCATAGAG CGGAGCAACT CATGCGCTCT CGCTACAGCG CTTTTGCCTT GAAAAAATTT GATTACATAA TCAAAACCCA GCACCCTGAC TTTCTTGGAG ACCTTACCTT AGCCAACCTT AATCTAGGCC CTCACCCACA CTGGCTTGGG CTAGATCTGA TAGCGAGCGA AGAATTTGTC AATTCAACTG CACTAAAACA AGGTACAGTC ACCTTCAAGG CTTGGTATAA ACTTGAAGGT GAAATCGATG CAATCTATGA ACATTCAGAA TTTATTTATC AGGATAACCG TTGGTATTAT ACCAAAGGTA AACAAATGAC GGCCAAACTA CCGAGTAGAA ATGATCCTTG TATTTGCCAT AGTGGTAAAA AATTCAAGCA ATGCTGTTTG AATTCCCTCT AA
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Protein sequence | MTMSPEYICP CGTGKYYRDC CEPLHLDSTF AHRAEQLMRS RYSAFALKKF DYIIKTQHPD FLGDLTLANL NLGPHPHWLG LDLIASEEFV NSTALKQGTV TFKAWYKLEG EIDAIYEHSE FIYQDNRWYY TKGKQMTAKL PSRNDPCICH SGKKFKQCCL NSL
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