Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1856 |
Symbol | |
ID | 5080167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2123520 |
End bp | 2124008 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499014 |
Product | hypothetical protein |
Protein accession | YP_001183378 |
Protein GI | 146292954 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.335311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTG ATGTTCCTTT AGTCAACGAA GCCCAAATTG GCACCCGCTT AAATGCGGCG ATAGAACACA ACAGGCGAGG TGAGTTTGCG CTGTTGTTGT CTTTATTATC GGTTGATGCG AGGGATATGG CGCAGTTTCA ATGGCAAAAA GACCTTGATA CTGCTCAAAA ATTACAGCAA CAGTTTGAGT TACCACCTAA GCAGCCCTTA CTGGCAGATT TATCCTTATT TGAACCTGTT GTTGATAATA GCCAAGTGTT TATCACGCAA GGGGCAAGAG CATTTCAACT ACAGCAGGCT TTGCAACCTG AGGCGTTAGT TATCCGTGGC GCTGAACCTA TGGCGATGGC TGAAGCTCTG AGTAATTGTG ATTTAACCAC TCAATTGCGT CAGCGTGGTC GCTTAACTTC ACCCCAGATT GAACTTATGC ACTTTGCTGA TCAATTAGCC ATTCAACGAA ATCTAATCCC TCTTCAAGCC ATTGCGTAA
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Protein sequence | MQIDVPLVNE AQIGTRLNAA IEHNRRGEFA LLLSLLSVDA RDMAQFQWQK DLDTAQKLQQ QFELPPKQPL LADLSLFEPV VDNSQVFITQ GARAFQLQQA LQPEALVIRG AEPMAMAEAL SNCDLTTQLR QRGRLTSPQI ELMHFADQLA IQRNLIPLQA IA
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