| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1851 |
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| Symbol | |
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| ID | 5079218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2114960 |
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| End bp | 2116864 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640499001 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001183373 |
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| Protein GI | 146292949 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000212765 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGT CAAAATCATA TCCAGTCTTT TTATTACTGA TCTTTTTAGC ATTATTTGCC
GGCGTTTTTC AAAATGAAAA TAGCCAATTG CAAATCCAGC AGCAACAAGA GCTCGAACGC
TTCAAAAGGG ATTTAACGGC TTACTCCCAA TGGCAAGGCA GTGGTAAAGA ACTCTTTAAC
GCCTTATCAA TCAAGTATCC ATTTCAATTT TTTCAGTATA TTAATGATAC TGATGGTGAG
CTAAATCATA CCGAAGGTAG CCTTACATCT GACAATGCAC ATCCATTGGC TGGATTATTC
TCCGTCGATT TATCCCATAC CCAGAAATTA GCCACAGGCC GATTGCAGGT CAAACTCAGT
GCGAACGCAC AAATAGCTCA ATCTATCTCA AATACAGAAA AACTCGGGTT AATGTTGTTG
CTGAGCTTCA TCATTCTGCT GGCCATTTTT ACGTTTTTAA TGGCAAAACT CAAAACGTCG
ATTCAATATG CCGCCGATTA TGTCTCACAT ATTTCCGATA TGAGCTTTTC CGCACTCGCC
GCCTCTAAAC TCAATGGCGA ATTAAATCCA CTTAAGCAGG CATTAGAAGA TTGCCGTCAT
CAGCTTAAAG TACAGCTTGA CACTCTCACA CAAGAAAATG AGAAACTGCA TAAAGTCGCC
TATCAGGATC CAATTACCGG CTTTGCTAGT CGACCACGCT TCACAAATAA ACTTGAAACC
ATCAATAATC CTGATATCCC TCAATTTGGA TTGATGGTCA TGGTTAAAGC AACCGAACTT
GCCAATATCA ATCAACACCA CGGACGTTCT GCGGGAGATG ATTATTTAGC CCGAGTAGCC
AACTGTATCC GTAAAACCTG TACTAAATAC CCTGACGCAC AATGTTACCG AGTGTCCAGC
GCTGATTTTG CCGTATTTAT ACCAGATACA GTGCTTAAAG ATGGGCCAAA ATTTTTAGAT
GAGTTAAAAG TGTATCTTGA TGAATATCAG CAAATGACCA AAACGGAATC TGTTGCTCAT
ATAGGTTTAG TCCCCTATCA ACAGGGTGTA GAGGCTATTT ATTTACTGAC CCTTGCCGAT
ACGGCGGTCA GTATTGCACA AACATTGGGC CCTAATAGTT ACCATATTCA AGAAAAACTC
GATGGTAATG AGCAATTTGG TGATGATCGT TGGAAACTTG CCATCCATGA CTTAATTAGT
CGTAAGGCTC TTAAATTCTA TCAACAACCC ATCCAACCCT GCCGCACTGA AGTCGAGGTT
TACCGCGAAC TGTTAGCCCG TTTTTATAAC AGTGAAGGTA AGTTTCTGCC GACAACCACT
GTGATTGCTA TGGCTGAGCG CCATGGAATG AGCACAGAGT TAGATAAACT AGTGGTGATC
AGTGCATTAA AGATGCTTAA GGAAAATCCA ACCATCAATG GCAATTTTGG GGTAAACATT
AGTGCTTTTT CAGCCCACCA AGAACTCTTT GTCGGGTGGC TAAAAGATAT TTTAGGCAAA
CAAAAATATA TTGCTTCTCG CTTAGTATTT GAGATTAACG AATCAGGTAT GCAATCCAAT
TTAGGCGCAA GCCACAAGTT TGTGCGTGAC GTGCATAGCG TGGGTTCTCG AGTCTCTATT
GAGCGTTTTG GCATGAGCTT CACTTCCTTT AAATTCTTCA GTGAGGTACG CCCCGACTAC
ATTAAGCTTG ATGGTAGCTA CACTTCAAAT ATCGATGAAG ATAACAATAA TAAATTTTTC
GTGCGTATGA TGGTCGACGT GGCAAGGCGA ATAGGTATCA GAGTGATTGC AACCAGTGTT
GAGCGACAAG AAGAAAAACT GACCCTAGAA AAACTCTTAG TCGATGGTCT TCAAGGCTAT
TATATTGCTC AGCCCCAAGC GATCACTAGC AGAGATCAAA TTTAG
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| Protein sequence | MTMSKSYPVF LLLIFLALFA GVFQNENSQL QIQQQQELER FKRDLTAYSQ WQGSGKELFN
ALSIKYPFQF FQYINDTDGE LNHTEGSLTS DNAHPLAGLF SVDLSHTQKL ATGRLQVKLS
ANAQIAQSIS NTEKLGLMLL LSFIILLAIF TFLMAKLKTS IQYAADYVSH ISDMSFSALA
ASKLNGELNP LKQALEDCRH QLKVQLDTLT QENEKLHKVA YQDPITGFAS RPRFTNKLET
INNPDIPQFG LMVMVKATEL ANINQHHGRS AGDDYLARVA NCIRKTCTKY PDAQCYRVSS
ADFAVFIPDT VLKDGPKFLD ELKVYLDEYQ QMTKTESVAH IGLVPYQQGV EAIYLLTLAD
TAVSIAQTLG PNSYHIQEKL DGNEQFGDDR WKLAIHDLIS RKALKFYQQP IQPCRTEVEV
YRELLARFYN SEGKFLPTTT VIAMAERHGM STELDKLVVI SALKMLKENP TINGNFGVNI
SAFSAHQELF VGWLKDILGK QKYIASRLVF EINESGMQSN LGASHKFVRD VHSVGSRVSI
ERFGMSFTSF KFFSEVRPDY IKLDGSYTSN IDEDNNNKFF VRMMVDVARR IGIRVIATSV
ERQEEKLTLE KLLVDGLQGY YIAQPQAITS RDQI
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