Gene Sputcn32_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1849 
Symbol 
ID5079216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2113655 
End bp2114254 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content47% 
IMG OID640498999 
Productelectron transport complex protein RnfB 
Protein accessionYP_001183371 
Protein GI146292947 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000101519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA TTTTAATCGC TGTCATATTA TTGACCCTGT TGGCATTGGT CTTTGGGGTA 
TTACTCGGTT TTGCCGCCCT TAAATTTAAG GTTGAAGGTA ACCCGATTGT CGATGAACTC
GAAGCCATTC TGCCACAAAC CCAATGTGGT CAATGTGGTT ACCCAGGTTG TCGTCCTTAT
GCCCAGGCCA TCGCCAATGG CGACAAAGTC AATAAATGCC CTCCAGGCGG CACAGCCACA
ATGGAGAAAC TAGCCAATTT GATGGGTGTT GAGCCTGAGC CTCTCAATGC CGAAGCGCAA
TCACAGGTCA AAAAAGTCGC TTTTATTCGT GAGGATGAGT GTATTGGCTG CACTAAGTGT
ATTCAGGCCT GTCCCGTGGA TGCCATTATC GGTGCAGGTA AATTAATGCA TACCGTGCTC
ACCACAGATT GCACAGGTTG TGACCTCTGT GTTGAACCCT GCCCTGTCGA TTGTATTGAT
ATGATCCCCG TAACCCAAAA TCTTAAAAAT TGGAATTGGC GTTTAAATGC CATTCCAGTG
ACGCTGCTCC AAGAGACTGG GGATAACGAG ACAATGTTAG AAGAGGACAA GCGGTGCTAA
 
Protein sequence
MSTILIAVIL LTLLALVFGV LLGFAALKFK VEGNPIVDEL EAILPQTQCG QCGYPGCRPY 
AQAIANGDKV NKCPPGGTAT MEKLANLMGV EPEPLNAEAQ SQVKKVAFIR EDECIGCTKC
IQACPVDAII GAGKLMHTVL TTDCTGCDLC VEPCPVDCID MIPVTQNLKN WNWRLNAIPV
TLLQETGDNE TMLEEDKRC