Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1849 |
Symbol | |
ID | 5079216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2113655 |
End bp | 2114254 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498999 |
Product | electron transport complex protein RnfB |
Protein accession | YP_001183371 |
Protein GI | 146292947 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000101519 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCA TTTTAATCGC TGTCATATTA TTGACCCTGT TGGCATTGGT CTTTGGGGTA TTACTCGGTT TTGCCGCCCT TAAATTTAAG GTTGAAGGTA ACCCGATTGT CGATGAACTC GAAGCCATTC TGCCACAAAC CCAATGTGGT CAATGTGGTT ACCCAGGTTG TCGTCCTTAT GCCCAGGCCA TCGCCAATGG CGACAAAGTC AATAAATGCC CTCCAGGCGG CACAGCCACA ATGGAGAAAC TAGCCAATTT GATGGGTGTT GAGCCTGAGC CTCTCAATGC CGAAGCGCAA TCACAGGTCA AAAAAGTCGC TTTTATTCGT GAGGATGAGT GTATTGGCTG CACTAAGTGT ATTCAGGCCT GTCCCGTGGA TGCCATTATC GGTGCAGGTA AATTAATGCA TACCGTGCTC ACCACAGATT GCACAGGTTG TGACCTCTGT GTTGAACCCT GCCCTGTCGA TTGTATTGAT ATGATCCCCG TAACCCAAAA TCTTAAAAAT TGGAATTGGC GTTTAAATGC CATTCCAGTG ACGCTGCTCC AAGAGACTGG GGATAACGAG ACAATGTTAG AAGAGGACAA GCGGTGCTAA
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Protein sequence | MSTILIAVIL LTLLALVFGV LLGFAALKFK VEGNPIVDEL EAILPQTQCG QCGYPGCRPY AQAIANGDKV NKCPPGGTAT MEKLANLMGV EPEPLNAEAQ SQVKKVAFIR EDECIGCTKC IQACPVDAII GAGKLMHTVL TTDCTGCDLC VEPCPVDCID MIPVTQNLKN WNWRLNAIPV TLLQETGDNE TMLEEDKRC
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