Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1845 |
Symbol | |
ID | 5079212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2108781 |
End bp | 2109479 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498995 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_001183367 |
Protein GI | 146292943 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000056167 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATT ATCGCGAAAT TGCTTGGCAA GGTCTGTGGA AAAATAACCC CGGCTTAGTA CAACTATTAG GCCTATGCCC GCTCCTTGCT GTCACAGCAA CCATAACCAA TGCCCTAGGG CTAGGTGTAG CCACTATGTT AGTGCTAATA GGCTCTAATA TTCTTGTGTC ACTTGTACGC GACTATGTGC CTAAAGAAAT CCGTATTCCC GTATTTGTGA TGATCATCGC CGCGCTAGTC ACCACAGTTC AGTTGCTCAT CAATGCCTAT GCCTATGGTC TGTATTTATC CCTTGGGATC TTCCTGCCGC TAATTGTAAC GAACTGCATC ATCATTGGCC GCGCCGAGGC ATTTGCCTCA CGTAACAATG CCTTTAGCGC CGCCTTCGAT GGTTTAATGA TGGGGCTAGG GTTTACCTTA GTGCTCGCCG TTCTTGGGGC AACACGGGAA TTATTAGGTC AAGGCACACT ATTTGATGGC GCCGATCAAT TGCTAGGCCC TTGGGCTAAA TCCTTAACTA TTCATGTATG GCAAGTGGAT ACCCCCTTTT TACTCGCTAT GCTGCCACCC GGCGCTTTTA TTGTGATGGG CTTATTGATT GCATTGAAGA ATGTAATTGA TAAAAAACTC AAAGAACACC AACCACAAGT CGCCACCGAG CCAAGTGTGA CACGCGCACG GATCACTAAG GTCAGTTAA
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Protein sequence | MTNYREIAWQ GLWKNNPGLV QLLGLCPLLA VTATITNALG LGVATMLVLI GSNILVSLVR DYVPKEIRIP VFVMIIAALV TTVQLLINAY AYGLYLSLGI FLPLIVTNCI IIGRAEAFAS RNNAFSAAFD GLMMGLGFTL VLAVLGATRE LLGQGTLFDG ADQLLGPWAK SLTIHVWQVD TPFLLAMLPP GAFIVMGLLI ALKNVIDKKL KEHQPQVATE PSVTRARITK VS
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