Gene Sputcn32_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1845 
Symbol 
ID5079212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2108781 
End bp2109479 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640498995 
Productelectron transport complex RsxE subunit 
Protein accessionYP_001183367 
Protein GI146292943 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000056167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATT ATCGCGAAAT TGCTTGGCAA GGTCTGTGGA AAAATAACCC CGGCTTAGTA 
CAACTATTAG GCCTATGCCC GCTCCTTGCT GTCACAGCAA CCATAACCAA TGCCCTAGGG
CTAGGTGTAG CCACTATGTT AGTGCTAATA GGCTCTAATA TTCTTGTGTC ACTTGTACGC
GACTATGTGC CTAAAGAAAT CCGTATTCCC GTATTTGTGA TGATCATCGC CGCGCTAGTC
ACCACAGTTC AGTTGCTCAT CAATGCCTAT GCCTATGGTC TGTATTTATC CCTTGGGATC
TTCCTGCCGC TAATTGTAAC GAACTGCATC ATCATTGGCC GCGCCGAGGC ATTTGCCTCA
CGTAACAATG CCTTTAGCGC CGCCTTCGAT GGTTTAATGA TGGGGCTAGG GTTTACCTTA
GTGCTCGCCG TTCTTGGGGC AACACGGGAA TTATTAGGTC AAGGCACACT ATTTGATGGC
GCCGATCAAT TGCTAGGCCC TTGGGCTAAA TCCTTAACTA TTCATGTATG GCAAGTGGAT
ACCCCCTTTT TACTCGCTAT GCTGCCACCC GGCGCTTTTA TTGTGATGGG CTTATTGATT
GCATTGAAGA ATGTAATTGA TAAAAAACTC AAAGAACACC AACCACAAGT CGCCACCGAG
CCAAGTGTGA CACGCGCACG GATCACTAAG GTCAGTTAA
 
Protein sequence
MTNYREIAWQ GLWKNNPGLV QLLGLCPLLA VTATITNALG LGVATMLVLI GSNILVSLVR 
DYVPKEIRIP VFVMIIAALV TTVQLLINAY AYGLYLSLGI FLPLIVTNCI IIGRAEAFAS
RNNAFSAAFD GLMMGLGFTL VLAVLGATRE LLGQGTLFDG ADQLLGPWAK SLTIHVWQVD
TPFLLAMLPP GAFIVMGLLI ALKNVIDKKL KEHQPQVATE PSVTRARITK VS