Gene Sputcn32_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1844 
Symbol 
ID5079211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2108124 
End bp2108765 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID640498994 
Productendonuclease III 
Protein accessionYP_001183366 
Protein GI146292942 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000031535 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG CAAAACGTAT CCAGATCCTC ACTCGTCTTC GTGATAACAA TCCGAAACCC 
GAAACTGAGC TCAACTTTAC TAGTCCTTTT GAGTTATTAG TCGCGGTAAC CCTCTCAGCA 
CAAGCGACCG ATGTGAGCGT GAATAAGGCG ACAGATAAAC TGTTTCCTGT CGCCAATACT 
GCCCACAGCA TTTATGCCCT AGGGGTTGAG GGATTAAAGG AATATATCAA GACCATTGGC 
CTTTATAACA ACAAAGCCGT TAATGTGATC AAAGCCTGCG AGATCTTAAT CGAGAAGTAC 
AATGGTGAAG TGCCAGAAGA TAGAGAAGCC CTTGAAGCAC TACCTGGTGT GGGCCGAAAA 
ACCGCGAACG TGGTGCTCAA TACCGCCTTT GGCTGGCCGA CCATTGCCGT AGATACTCAT 
ATTTTTCGTC TTGCCAATCG CACTAAATTT GCCCCCGGTA AAAACGTGGT CGAAGTAGAA 
GAACGGATGC TAAAAGTTGT GCCGGATGAG TTTAAAGTGG ATGTACATCA TTGGTTTATT 
CTGCACGGCC GCTACACATG CTTAGCACGA AAGCCACGCT GTGGCAGTTG CATTATTGAG 
GATTTGTGTG AGTTTAAAGA GAAGGTTTAT CCCGAAGAAT AA
 
Protein sequence
MNQAKRIQIL TRLRDNNPKP ETELNFTSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT 
AHSIYALGVE GLKEYIKTIG LYNNKAVNVI KACEILIEKY NGEVPEDREA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IFRLANRTKF APGKNVVEVE ERMLKVVPDE FKVDVHHWFI 
LHGRYTCLAR KPRCGSCIIE DLCEFKEKVY PEE