Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1835 |
Symbol | |
ID | 5079202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2096490 |
End bp | 2096735 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640498985 |
Product | hydrogenase assembly chaperone hypC/hupF |
Protein accession | YP_001183357 |
Protein GI | 146292933 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0298] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTTAT CCATTCCTTC CCAAGTCGTG GCCATTGATG CCGAGCGCCA GAGTGTCACC GTCGACACCT TAGGGGTTCG CCGCGATGTC AGTAGTCATT TAATGACTGA GCCGCTTGAA ATTGGTGACT ATGTGCTTAT TCATATTGGC TTTGTGATGA ATAAAATTGA CAAAGAAGAT GCACAACAAA GTCTTGAACT TTATCAAGAA ATCGTCACAA AACTTGAAAA TGAAGCCATG CATTAA
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Protein sequence | MCLSIPSQVV AIDAERQSVT VDTLGVRRDV SSHLMTEPLE IGDYVLIHIG FVMNKIDKED AQQSLELYQE IVTKLENEAM H
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