| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1834 |
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| Symbol | |
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| ID | 5079201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2095289 |
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| End bp | 2096428 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640498984 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001183356 |
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| Protein GI | 146292932 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAC TAAAACACCT CTACCAAGGC TTTCGCGATC CCCAGACTAT CGCCAATTTG
GCGCGGGACA TTCAGCTAAC GGCTAAAACG ATCAAGCAAC AAATCAATAT TATGGAGGTG
TGTGGTGGCC ATACCCACAC CATAATGAAA TACGGTTTGT TGGATTTACT GCCGGATAAT
ATTGAATTTA TCCACGGCCC GGGTTGCCCT GTATGCGTGA TGCCAAAGGA ACGTATCGAC
CAAGCCGCAG CGCTTGCCTC CCAAGAAAAT GTGATCCTTG TGACGCTGGG CGATATGATC
CGCGTGCCCG GTTCTCAAGG CTCTTTAGCC AGTTTTAGGG CTAAAGGCTG CGATATCCGC
CCGATTTACG ATCCCTTAGA TACGCTCAAA ATTGCCCGTG ATAACCCCGA TAAAATCGTT
GTTTTTTTCG CCATAGGTTT TGAAACCTCA ACGCCAATGA CGGCAATTCT GCTTCAACTC
GCCGAACATG AAAAACTCGA TAACCTGCTT TTCCATATCA ACCATGTATT AGTGCCTCCT
GCCATTGATG CCGTCATGCA CGATCCTAAT GCGCGAGTGA ATGCCTTTAT TGGCCCGGCC
CATGTCAGTG TGATAAGTGG CGCTAAAATC TACCGCCCAG CGGTCGCACA ATATGGCACA
CCCGTAGTGG TCTCAGGTTT TGAACCTGTC GATGTAATGG AATCCATCCT GCGTATTGTC
CGACAAAAAG CGGCAGGGAA AGCCGAGCTT GATATCCAAT ATAGCCGCGC CGTATCAGAG
GATGGCAATC TCACAGCACA AGCTAAAGTG AACCAATTCT TTAGTGTTAG ACCGCAATTT
CGCTGGCGCG GCCTTGGCCC AATACCCAAT TCAGCGCTGC AACTCAGACC TGAATATGCC
CATAGAGACG CCGAACTACG GTTTAAAGAT CGCTTGCCCG TGAAAGAAAT TGATGATCAT
AAGGCCTGTC AGTGCGGTGA TATTCTTCGC GGCCTCGCGA AGCCTAAGGA CTGCAAAGTC
TTTGGCCGAG GTTGCAACCC TGAAACGCCA TTAGGCAGTT GTATGGTCAG CTCTGAAGGC
GCCTGCAATG CCTATTACCG CTATCAAGGC GTCGATATTA AGGAGCCACA TCATGGGTGA
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| Protein sequence | MLELKHLYQG FRDPQTIANL ARDIQLTAKT IKQQINIMEV CGGHTHTIMK YGLLDLLPDN
IEFIHGPGCP VCVMPKERID QAAALASQEN VILVTLGDMI RVPGSQGSLA SFRAKGCDIR
PIYDPLDTLK IARDNPDKIV VFFAIGFETS TPMTAILLQL AEHEKLDNLL FHINHVLVPP
AIDAVMHDPN ARVNAFIGPA HVSVISGAKI YRPAVAQYGT PVVVSGFEPV DVMESILRIV
RQKAAGKAEL DIQYSRAVSE DGNLTAQAKV NQFFSVRPQF RWRGLGPIPN SALQLRPEYA
HRDAELRFKD RLPVKEIDDH KACQCGDILR GLAKPKDCKV FGRGCNPETP LGSCMVSSEG
ACNAYYRYQG VDIKEPHHG
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