Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1830 |
Symbol | ihfA |
ID | 5079197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2092462 |
End bp | 2092758 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498980 |
Product | integration host factor subunit alpha |
Protein accession | YP_001183352 |
Protein GI | 146292928 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00321456 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTA CCAAAGCCGA AATGGCAGAA CATCTTTTTG AAACACTGGG AATGAACAAG CGTGTCGCCA AAGAGATGGT TGAGTCGTTC TTTGAAGAAA TTCGGGGCGC ACTTGAAAGT GGTGAGCAGG TCAAGTTATC TGGCTTTGGC AACTTTGACC TTAGGGACAA GAATCAAAGA CCGGGAAGGA ACCCAAAAAC AGGCGAAGAT ATTCCTATTT CTGCTCGCCG TGTCGTGACT TTCCGTCCCG GCCAGAAGCT GAAAACTCGT GTAGAAGCTG CAAATACGGG TAAATAA
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Protein sequence | MALTKAEMAE HLFETLGMNK RVAKEMVESF FEEIRGALES GEQVKLSGFG NFDLRDKNQR PGRNPKTGED IPISARRVVT FRPGQKLKTR VEAANTGK
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