Gene Sputcn32_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1818 
Symbol 
ID5079185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2068767 
End bp2069660 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content53% 
IMG OID640498968 
ProductLysR family transcriptional regulator 
Protein accessionYP_001183340 
Protein GI146292916 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATGGCT TTATGGTGTT TGTGCAGGTC GCCGAGCAGC GCAGCTTTGT TGGGGCAGGT 
CGTGAGCTTG GTGTGTCGGC TTCCGCGGTA GGTAAGAGCG TGGTACGACT GGAAGAAAAA
CTGGGAGTGC GTCTGTTCAA CCGCAGCACC CGCAGTGTTA CGCTAACAGC CGAAGGTTTG
TTGTTTTTGG AGCGTAGCCG CCGCATTTTG GCTGAAATTG AAGCGGCACA ACTGGAATTA
TCCCAGGCCA CGGGGGCACC GCGCGGACGT CTTCGTGTAA GCCTGCCGCT GGTGAGCTCG
TTGGTGTTGC CAGTGCTGGG TGAATTTATG CGTGAATACC CGGATATCGA ACTGGATCTG
GATTTTACCG ACCGTATGGT CGATGTGATT GAAGAAGGTT TTGATGCGGT AGTACGCACC
GGTGAGCCAC AGGATTCACG TTTGTCAGCC CGGCGTTTGG GTAACTTTCA AATGCGGCTG
GTTGCCTCAC CTGATTACCT AGCACTCAGA GGTACGCCGC AAACACCTGC CGACTTACTA
CAACACAGCT GTCTGCACTA CCGTTTTCCC AACAGTGGCA AGCTCGAAAC CTGGGCGCTA
AAACAGCCAC TTGATGAGCC TAAACTACAA CTTCCCACCT CAATGATTTG CAACAATATA
GAGACTCGCC TGTGCTTCGC GCTACAGGGA TTAGGGATCG CCTATTTGCC GGACTTTGCT
ATCCATGAGC CGCTGGCTAA TGGGAGACTG CGACCCATAC TCGCCGACTA TGTGCAGCGT
ACTGGTACCT TTTATATTCT CTGGCCTGCC AGCAAACATC CATTGCCCAA AGTGCGGGCT
CTGGTTGATT TTCTTTGTGC AAAGCTGTTT GCGTCAGACG ACACCAAACG ATAA
 
Protein sequence
MNGFMVFVQV AEQRSFVGAG RELGVSASAV GKSVVRLEEK LGVRLFNRST RSVTLTAEGL 
LFLERSRRIL AEIEAAQLEL SQATGAPRGR LRVSLPLVSS LVLPVLGEFM REYPDIELDL
DFTDRMVDVI EEGFDAVVRT GEPQDSRLSA RRLGNFQMRL VASPDYLALR GTPQTPADLL
QHSCLHYRFP NSGKLETWAL KQPLDEPKLQ LPTSMICNNI ETRLCFALQG LGIAYLPDFA
IHEPLANGRL RPILADYVQR TGTFYILWPA SKHPLPKVRA LVDFLCAKLF ASDDTKR