Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1818 |
Symbol | |
ID | 5079185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2068767 |
End bp | 2069660 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640498968 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001183340 |
Protein GI | 146292916 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATGGCT TTATGGTGTT TGTGCAGGTC GCCGAGCAGC GCAGCTTTGT TGGGGCAGGT CGTGAGCTTG GTGTGTCGGC TTCCGCGGTA GGTAAGAGCG TGGTACGACT GGAAGAAAAA CTGGGAGTGC GTCTGTTCAA CCGCAGCACC CGCAGTGTTA CGCTAACAGC CGAAGGTTTG TTGTTTTTGG AGCGTAGCCG CCGCATTTTG GCTGAAATTG AAGCGGCACA ACTGGAATTA TCCCAGGCCA CGGGGGCACC GCGCGGACGT CTTCGTGTAA GCCTGCCGCT GGTGAGCTCG TTGGTGTTGC CAGTGCTGGG TGAATTTATG CGTGAATACC CGGATATCGA ACTGGATCTG GATTTTACCG ACCGTATGGT CGATGTGATT GAAGAAGGTT TTGATGCGGT AGTACGCACC GGTGAGCCAC AGGATTCACG TTTGTCAGCC CGGCGTTTGG GTAACTTTCA AATGCGGCTG GTTGCCTCAC CTGATTACCT AGCACTCAGA GGTACGCCGC AAACACCTGC CGACTTACTA CAACACAGCT GTCTGCACTA CCGTTTTCCC AACAGTGGCA AGCTCGAAAC CTGGGCGCTA AAACAGCCAC TTGATGAGCC TAAACTACAA CTTCCCACCT CAATGATTTG CAACAATATA GAGACTCGCC TGTGCTTCGC GCTACAGGGA TTAGGGATCG CCTATTTGCC GGACTTTGCT ATCCATGAGC CGCTGGCTAA TGGGAGACTG CGACCCATAC TCGCCGACTA TGTGCAGCGT ACTGGTACCT TTTATATTCT CTGGCCTGCC AGCAAACATC CATTGCCCAA AGTGCGGGCT CTGGTTGATT TTCTTTGTGC AAAGCTGTTT GCGTCAGACG ACACCAAACG ATAA
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Protein sequence | MNGFMVFVQV AEQRSFVGAG RELGVSASAV GKSVVRLEEK LGVRLFNRST RSVTLTAEGL LFLERSRRIL AEIEAAQLEL SQATGAPRGR LRVSLPLVSS LVLPVLGEFM REYPDIELDL DFTDRMVDVI EEGFDAVVRT GEPQDSRLSA RRLGNFQMRL VASPDYLALR GTPQTPADLL QHSCLHYRFP NSGKLETWAL KQPLDEPKLQ LPTSMICNNI ETRLCFALQG LGIAYLPDFA IHEPLANGRL RPILADYVQR TGTFYILWPA SKHPLPKVRA LVDFLCAKLF ASDDTKR
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