Gene Sputcn32_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1817 
Symbol 
ID5079184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2067437 
End bp2068630 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID640498967 
Productbeta-lactamase 
Protein accessionYP_001183339 
Protein GI146292915 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.97636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA ACACATTTCC CCTGCCTCGA AGCGTAGTGC CCATACCGCT CTCAGCCCGC 
ATCCAAAACG TTATTGAGCA AGCATTACAT GAGCAACGAT TAGTGGGTGC TGTCGTGCTG
GTCGCTCGGA ACTGTGAGCT TATCTACCAG CAGGCAGCAG GTTATGCCGA CCGGGAAAGT
GCAAGGCCGA TGGCGGTGGA TACGGTTTTT CGCCTGGCCT CGGTGAGTAA ACCTATTGTC
TCTGCCGCCG CACTGGTATT GGTAGCACAA GGTCGACTAG AGCTGGACGA GAACATTGGC
AACTGGCTGC CTGATTTTCA GCCAAGGTTG GCCGATGGCC GCCTAGCCCG GATCACCGTT
CGGCAGTTGC TTAGCCATAC GGCCGGCTTG GGTTATCGCT TTTTCGAAGC CGACGAAAAG
AGCCCCTACG CGTTGGTGGG TGTATCGGAT GGCATGGATG CGTCGGGCAT TAGCCTGCAG
GAAAACCTTA AGCGCATCGC CAGTGTGTCG CTGTTGTATG AGCCGGGCAC AGCTTGGGGC
TATTCGCTGG CAACCGATGT GCTGGGTGCA TTGATTGAGC GCGTTTATGG TACCTCGCTA
AACGAAGCAA TACACCATTT GGTGACCGGC CCCTTAGGCA TGAATGATAC CGGTTTTGTC
GCAGGTGATC CGCAGCGCAT GGCCACCGCT TATGTTAACG ATGCACCACA GCCACATCAA
CTGGCAGAAG GGGAAACCGT CTCACCTTTT GAGGGCACAA TTGGTATCAA ATACAGCCCA
GCTCGTATCT TCGATGCACA GTCTTTTCCA TCCGCAGGTG CAGGCATGGC GGGCACGGCC
GGGGATTTTC TGCGCCTGTT GGAAGCCCTG CGTCAAGAAG GCGGCGGGCT ATTGCCCAAA
GAACTGGTGG CAGAAATGGC GCGGGATCAG ACAGGAGGAT TGGAACTGCC TAATTCACCG
GGTTTTGGTT TTGGCCTGGG GTTCTCGGTG CTGCGTGACC CAAAACTTGC CGCTTCTCCC
GAGTCAGCAG GCACATGGCG CTGGGGCGGT GCTTACGGCC ATTCCTGGTT TGTGGATCGG
GCCCAGGGGC TTAGTATGGT GGCTTTTACC AATACCCTGT ATGAGGGCAT GTGTGGCCGT
TTCGTTATTG AGCTACGGGA TGCCGTGTAT GACGGGTCTG AGGTGCAGCG ATGA
 
Protein sequence
MTTNTFPLPR SVVPIPLSAR IQNVIEQALH EQRLVGAVVL VARNCELIYQ QAAGYADRES 
ARPMAVDTVF RLASVSKPIV SAAALVLVAQ GRLELDENIG NWLPDFQPRL ADGRLARITV
RQLLSHTAGL GYRFFEADEK SPYALVGVSD GMDASGISLQ ENLKRIASVS LLYEPGTAWG
YSLATDVLGA LIERVYGTSL NEAIHHLVTG PLGMNDTGFV AGDPQRMATA YVNDAPQPHQ
LAEGETVSPF EGTIGIKYSP ARIFDAQSFP SAGAGMAGTA GDFLRLLEAL RQEGGGLLPK
ELVAEMARDQ TGGLELPNSP GFGFGLGFSV LRDPKLAASP ESAGTWRWGG AYGHSWFVDR
AQGLSMVAFT NTLYEGMCGR FVIELRDAVY DGSEVQR