Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1817 |
Symbol | |
ID | 5079184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2067437 |
End bp | 2068630 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640498967 |
Product | beta-lactamase |
Protein accession | YP_001183339 |
Protein GI | 146292915 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.97636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCA ACACATTTCC CCTGCCTCGA AGCGTAGTGC CCATACCGCT CTCAGCCCGC ATCCAAAACG TTATTGAGCA AGCATTACAT GAGCAACGAT TAGTGGGTGC TGTCGTGCTG GTCGCTCGGA ACTGTGAGCT TATCTACCAG CAGGCAGCAG GTTATGCCGA CCGGGAAAGT GCAAGGCCGA TGGCGGTGGA TACGGTTTTT CGCCTGGCCT CGGTGAGTAA ACCTATTGTC TCTGCCGCCG CACTGGTATT GGTAGCACAA GGTCGACTAG AGCTGGACGA GAACATTGGC AACTGGCTGC CTGATTTTCA GCCAAGGTTG GCCGATGGCC GCCTAGCCCG GATCACCGTT CGGCAGTTGC TTAGCCATAC GGCCGGCTTG GGTTATCGCT TTTTCGAAGC CGACGAAAAG AGCCCCTACG CGTTGGTGGG TGTATCGGAT GGCATGGATG CGTCGGGCAT TAGCCTGCAG GAAAACCTTA AGCGCATCGC CAGTGTGTCG CTGTTGTATG AGCCGGGCAC AGCTTGGGGC TATTCGCTGG CAACCGATGT GCTGGGTGCA TTGATTGAGC GCGTTTATGG TACCTCGCTA AACGAAGCAA TACACCATTT GGTGACCGGC CCCTTAGGCA TGAATGATAC CGGTTTTGTC GCAGGTGATC CGCAGCGCAT GGCCACCGCT TATGTTAACG ATGCACCACA GCCACATCAA CTGGCAGAAG GGGAAACCGT CTCACCTTTT GAGGGCACAA TTGGTATCAA ATACAGCCCA GCTCGTATCT TCGATGCACA GTCTTTTCCA TCCGCAGGTG CAGGCATGGC GGGCACGGCC GGGGATTTTC TGCGCCTGTT GGAAGCCCTG CGTCAAGAAG GCGGCGGGCT ATTGCCCAAA GAACTGGTGG CAGAAATGGC GCGGGATCAG ACAGGAGGAT TGGAACTGCC TAATTCACCG GGTTTTGGTT TTGGCCTGGG GTTCTCGGTG CTGCGTGACC CAAAACTTGC CGCTTCTCCC GAGTCAGCAG GCACATGGCG CTGGGGCGGT GCTTACGGCC ATTCCTGGTT TGTGGATCGG GCCCAGGGGC TTAGTATGGT GGCTTTTACC AATACCCTGT ATGAGGGCAT GTGTGGCCGT TTCGTTATTG AGCTACGGGA TGCCGTGTAT GACGGGTCTG AGGTGCAGCG ATGA
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Protein sequence | MTTNTFPLPR SVVPIPLSAR IQNVIEQALH EQRLVGAVVL VARNCELIYQ QAAGYADRES ARPMAVDTVF RLASVSKPIV SAAALVLVAQ GRLELDENIG NWLPDFQPRL ADGRLARITV RQLLSHTAGL GYRFFEADEK SPYALVGVSD GMDASGISLQ ENLKRIASVS LLYEPGTAWG YSLATDVLGA LIERVYGTSL NEAIHHLVTG PLGMNDTGFV AGDPQRMATA YVNDAPQPHQ LAEGETVSPF EGTIGIKYSP ARIFDAQSFP SAGAGMAGTA GDFLRLLEAL RQEGGGLLPK ELVAEMARDQ TGGLELPNSP GFGFGLGFSV LRDPKLAASP ESAGTWRWGG AYGHSWFVDR AQGLSMVAFT NTLYEGMCGR FVIELRDAVY DGSEVQR
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