| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1816 |
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| Symbol | |
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| ID | 5079183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2066223 |
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| End bp | 2067440 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640498966 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001183338 |
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| Protein GI | 146292914 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCA CTGCACCAGA TCGTCTGCCA CTGGCCGCTC TGCTGGCGCT GGCCTTAGCT
GGTTTTGTTA CCATCCTGAC CGAGGCGTTA CCCGCCGGCC TTTTACCGCA AATTGGCGCA
GGATTGGGTG TTTCAGAAGC GCTTGCTGGT CAGCTTGTGA CTGTTTATGC CATTGGCTCT
CTGCTGATGG CTATTCCGCT GATGACAATT ACACAAGGTG TACGGCGCCG ACCTTTGTTG
CTGGCAGCAA TAGTGGGCTT TGCTGTCGCC AATACAGTAA CAACGTTTTC TACCAGTTAC
ACCCTCACCT TGGTGGCCCG CTTTCTGGCC GGTGTGGCGG CAGGTTTGTT GTGGGCCTTA
CTGGCAGGTT ATGCCAGCCG CATGGTGCCT GAGCACCTTA AGGGACGTGC TATTGCGATA
GCGATGGTCG GTACACCGCT AGCACTTTCT TTAGGTGTTC CGGCCGGTAC CTTGCTAGGC
AATTTGGTCG GATGGCGTGT CTGTTTTGGT ATTATGAGTG TGTTGGCACT AATGCTGATT
GTTTGGGTTC GGCTGAAAGT GCCGGACTTT GCTGGCCAAG CCACGGGTAA ACGACTGTCA
CTTAGGCAGG TATTTACGCT GCCGGGTATT CGCCCTGTGT TGTTTGTGGT GCTGGCCTTT
GTGCTCGCAC ACAACATTCT TTACACCTAC ATCGCCCCGT TTTTATCGGC TGCCGGAATG
GCAGAGCGAA CCGATCTGGT TCTGCTGGTC TTTGGTATGA CCGCGCTACT TGGAATTTGG
GTTATTGGCG TGTTAATTGA CCATCATTTA CGTATTCTAA CGCTTGCCAG CATAGTGCTG
TTTGCCCTGA CAGCAATAGT GCTGGGCCTT GCTGGCGACG TGCCTGTGGC AGTTTATTGC
GCAGTGGCTG CCTGGGGGTT GGCATTTGGT GGCGCTGCAA CCTTGTTCCA AACGGGACTC
GCTAAGGCGG CCGGATCGGC CGCCGATGTT GCCCAGTCTA TGCTGGTTAC CGCCTGGAAC
CTGGCTATCG CAGGTGGTGG CATCGTCGGT GGTGTATTGC TTGAGCAGCT TGGCGTCAGC
TCATTCTCAC CGGCTTTACT TATATTGCTG GTGGCAGCAC TAATCGTTGT GTGGGCAGCT
AGGAAGCACG GGTTTGCCGC ACCGGAAGAT GCAGCTATAC CCTGTCCATC GACGCCCAAG
CAACAGACAG AGGTGTAG
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| Protein sequence | MKSTAPDRLP LAALLALALA GFVTILTEAL PAGLLPQIGA GLGVSEALAG QLVTVYAIGS
LLMAIPLMTI TQGVRRRPLL LAAIVGFAVA NTVTTFSTSY TLTLVARFLA GVAAGLLWAL
LAGYASRMVP EHLKGRAIAI AMVGTPLALS LGVPAGTLLG NLVGWRVCFG IMSVLALMLI
VWVRLKVPDF AGQATGKRLS LRQVFTLPGI RPVLFVVLAF VLAHNILYTY IAPFLSAAGM
AERTDLVLLV FGMTALLGIW VIGVLIDHHL RILTLASIVL FALTAIVLGL AGDVPVAVYC
AVAAWGLAFG GAATLFQTGL AKAAGSAADV AQSMLVTAWN LAIAGGGIVG GVLLEQLGVS
SFSPALLILL VAALIVVWAA RKHGFAAPED AAIPCPSTPK QQTEV
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