| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1804 |
|---|
| Symbol | |
|---|
| ID | 5079265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2050338 |
|---|
| End bp | 2050673 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498954 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183327 |
|---|
| Protein GI | 146292903 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000561041 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TGAGAACATT TCAGATTATC CTCGCAACAT TGTCCATTTT AGGCTGGATA
TTCGCCGTAT ACGCATTATT GGTTTTTGGC GAGGCAAGGC CAGATCGCGA GGTAGGGACT
TATCTTAGCC GTGGTGCGGT GTTACGGGCT GAATGGGATC CCCATAGAAC GCAATTGCTA
GAATATTTAA TTTGGACCTG CGGTGGGATC AGCCTTTTGA GTTTAGCGGT TAACTATTAT
GTCGCCCAAC ACAGTAAATT AGGCTATTGG TTCAACATTC CGCTATTACT GCTCACCTCG
ATTGTCGCTG GCTTATATAT TCGCTTTGTC ATTTAA
|
|---|
| Protein sequence | MSKVRTFQII LATLSILGWI FAVYALLVFG EARPDREVGT YLSRGAVLRA EWDPHRTQLL
EYLIWTCGGI SLLSLAVNYY VAQHSKLGYW FNIPLLLLTS IVAGLYIRFV I
|
|---|
| |