| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1796 |
|---|
| Symbol | |
|---|
| ID | 5079257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2041041 |
|---|
| End bp | 2041886 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498947 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183320 |
|---|
| Protein GI | 146292896 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA AGGTAATAGC CTGTGGCATA GCCTCATTCG CAATGCTTTC ACTGAGTGGT
TGTAGTGCAT TTTTTAACGG TAATACTACG GAGAAAAATG CGGTATCGAG TAGCTTAGTC
GAATATTTAT ACCCTGATGA GAAGAGTCGC CAAGCCCAGC AGCCATCCTT ACCTGTGCTA
CGTTTACCGA TTACCGTCGG CATCGCTTTT TTGCCATCAT CCCATTGGCA ACATGATGCA
ATTGATAGCC GAACTCAGAT GGCCTTGCTT GATAAGGTTA AAAAATCCTT TGTCAAATAT
GACTATATCG ATCGTATCGA AGTGATCCCA AGTACCTATC TTAAAAATGG TAAAGGTTTT
GAAACCTTGC AGCAGGTTGC TCGCCTGCAT GATGTTGATG TGATGGCATT GGTTTCTTAC
GATCAATTGA TGCAAAGCCA CGAGAACAAA TCCGCCATTC TTTATTGGAC GATTGTGGGC
ATGTATTTAA TCCCTGGCAA TGAAAATGCG ATTCAAACCT TTGTTGATAC AGCCGTTTTC
GATATGCGTA GCCAGAAGAT GCTATTTAGG GCGCCAGGCA TTAATCAGTT AACTGAGAGT
TCAACCGCTG TTGGCGTGAC GACAACCTTA AGAGAAAAAT CCTACGAGGG CTTTGATCTC
GCGGTGAACG ACATGATAGT CAATTTAGAT GACGAGCTTG CCCGTTTTAA AACTCGGGTT
AAGGAAGAGC ACGTCGCCAC CATAGAACAT AAGCAAGGTT ACAGCGGCGG TGGCAGCTTA
TCGCTATTGA TACTTTCATT ACTGGGGATT TTTGCGGTGC GCCGTTTAAC CATCTGCCGA
GAATAG
|
|---|
| Protein sequence | MKFKVIACGI ASFAMLSLSG CSAFFNGNTT EKNAVSSSLV EYLYPDEKSR QAQQPSLPVL
RLPITVGIAF LPSSHWQHDA IDSRTQMALL DKVKKSFVKY DYIDRIEVIP STYLKNGKGF
ETLQQVARLH DVDVMALVSY DQLMQSHENK SAILYWTIVG MYLIPGNENA IQTFVDTAVF
DMRSQKMLFR APGINQLTES STAVGVTTTL REKSYEGFDL AVNDMIVNLD DELARFKTRV
KEEHVATIEH KQGYSGGGSL SLLILSLLGI FAVRRLTICR E
|
|---|
| |