| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1779 |
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| Symbol | rnhA |
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| ID | 5079238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2025488 |
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| End bp | 2025958 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498928 |
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| Product | ribonuclease H |
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| Protein accession | YP_001183303 |
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| Protein GI | 146292879 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000616595 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAC GAAAACTGAT CCACATCTTC ACTGACGGCT CTTGCTTAGG CAACCCCGGC
CCCGGTGGCT ATGGCATTGT AATGAATTAT AAGGGTCATA CAAAGGAGAT GTCCGACGGT
TTTGCACTTA CCACCAATAA TCGCATGGAA TTGTTGGCAC CAATCATCGC CCTAGAAAGT
CTTAAAGAAC CTTGCAGAGT CGTTCTTACC AGTGATAGTC AATATATGCG CCAAGGCATA
ATGACGTGGA TCCACGGTTG GAAGAAAAAA GGGTGGATGA CCTCAAACCG TACGCCTGTC
AAAAATGTGG ATCTTTGGAA ACGCTTAGAT AAAGTATCGC AAATGCACAC TATCGATTGG
CAATGGGTAA AAGGCCACGC TGGCCATGCT GAAAACGAGC GTTGTGATAT CCTAGCACGC
TCCGCGGCTG AAGCGAATCC AACCCAAATC GATGAAGGTT ATCAACCTTA A
|
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| Protein sequence | MTERKLIHIF TDGSCLGNPG PGGYGIVMNY KGHTKEMSDG FALTTNNRME LLAPIIALES
LKEPCRVVLT SDSQYMRQGI MTWIHGWKKK GWMTSNRTPV KNVDLWKRLD KVSQMHTIDW
QWVKGHAGHA ENERCDILAR SAAEANPTQI DEGYQP
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