| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1769 |
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| Symbol | |
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| ID | 5079228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2013471 |
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| End bp | 2014874 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498918 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001183293 |
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| Protein GI | 146292869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.327095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTT CCAAACTTGG ATTAAGCGAT CCGATTGTAA AAGCCATCAC AGAACTCGGT
TATGCAAGCC CGACCCCCAT TCAAACCAAA GCGATACCAG TGATCCTAAG CGGTAAAAAC
GTACTCGGCG CTGCACAAAC AGGCACAGGT AAAACCGCCA GCTTTGTGTT ACCTCTATTG
CAAATGTTTG CTGATGCCCC AAAAATTCGC CCCAAGCGAG TACGCGCCAT TATCCTTACA
CCGACCCGTG AACTTGCCGT TCAGGTTGAG GAAAATATCC GCCAATACGC TAAATATCTG
CCACTCACCT CTATGGCGAT GTACGGAGGT GTCGATGCCG CACCTCAAAA GAAAAAACTG
ATTGAAGGTG TAGATATCTT AGTCGCAACA CCTGGTCGAT TACTCGATAT GTACACCCAA
AGAGCCATTC ACTTCGATGA ATTATCTGTA CTGGTATTAG ATGAAGCCGA CCGAATGCTC
GACATGGGAT TTATTGAAGA TATCAATAAA ATCATCGAAA AATTACCGCC ACAAAGGCAA
AACTTGCTCT TCTCGGCCAC CCTGTCAAAG CAAGTGCGCG TATTAGCTAA GACCGCCGTT
GAAAATCCTA TCGAGATTGA AATTGCACGA AACGCGGCCA CGGCGCCACA AATAGATCAG
TGGCTCACCA CAGTTGATAA AGATAAAAAA TCTGCGTTAC TCAGCCATCT GATTAAAGAA
CAAGCGTGGG ATCAAGCGTT AATTTTTATC CAGACCAAGC AAGGTGCCGC CAAATTAGTC
AGTCAGCTTG AAAAGCGCGA CATTGGCGCA GAAGCCTTCC ACAGTGGCCG CAGTCAAGCG
GTTCGTGAGC AGCTTTTAGC CGATTTTAAA TCCGGTAAAC TGGCATTTTT AGTGGCGACA
GGAGTTGCAT CACGCGGAAT CGATATCGAT GCCCTCACCC GCGTTGTGAA TTATGACTTG
CCCGATGAAG CCGATGATTA TATTCATCGT ATTGGTCGAA CAGGCCGCGC AGGAGAGCAT
GGTGAAGCGA TATCTTTTGT GTCAAAGGAT GATTTTAAGA ACCTCTGTGC CATTGAGCGC
CGTTTAGGTC ACCTTATAGT GCGTAAAGAA GTCGAAGGCT TTGCTCCTAA AAAAGAAGTG
CCAATCTCCA TTCTCGATTT TGTGCCAAAA CATAAGCCGG AGAAAACATT TCGCCCAACA
GAGTCTGCAG CGGGAACTTA CCGCAGTGCA AAGGAAGGGA CTTTTGAAAC GGCTAAGGCG
AAAAAGCATC GCAGTGCAAA GTCGCAACCA AAACCAACGA CGAACGCGAC TTTACGTCCA
ACAAGAACGG CAGAGGGAAG TCCAAAACAA CAGGACAGTG GTGCCCCTTT TAATCCATGG
GCCAGCGGAC CTAAAACCAA GTAA
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| Protein sequence | MPFSKLGLSD PIVKAITELG YASPTPIQTK AIPVILSGKN VLGAAQTGTG KTASFVLPLL
QMFADAPKIR PKRVRAIILT PTRELAVQVE ENIRQYAKYL PLTSMAMYGG VDAAPQKKKL
IEGVDILVAT PGRLLDMYTQ RAIHFDELSV LVLDEADRML DMGFIEDINK IIEKLPPQRQ
NLLFSATLSK QVRVLAKTAV ENPIEIEIAR NAATAPQIDQ WLTTVDKDKK SALLSHLIKE
QAWDQALIFI QTKQGAAKLV SQLEKRDIGA EAFHSGRSQA VREQLLADFK SGKLAFLVAT
GVASRGIDID ALTRVVNYDL PDEADDYIHR IGRTGRAGEH GEAISFVSKD DFKNLCAIER
RLGHLIVRKE VEGFAPKKEV PISILDFVPK HKPEKTFRPT ESAAGTYRSA KEGTFETAKA
KKHRSAKSQP KPTTNATLRP TRTAEGSPKQ QDSGAPFNPW ASGPKTK
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