Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1762 |
Symbol | |
ID | 5079320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2008916 |
End bp | 2010019 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498911 |
Product | ribonuclease D |
Protein accession | YP_001183286 |
Protein GI | 146292862 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000618336 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCCACT ATGTGAGTGA TGAAGTGAGC CTTAACGCCC TCGTTGCTCA ATATCAGCAA AGTAAAATAC TCGTGTTAGA TACCGAGTTT GTTCGTACCC GTACTTATTA TGCAAAGTTA GGTTTGATCC AAGCTTATGA TGGAAAAACC TTGGCGTTGA TTGATCCTGT CGCGCTACCC GATCTCGCCA AATTCTGGGC TTTGTTGGCG AATCCCAATA TTATTAAATT AGTGCATTCT TGTAGTGAAG ACCTAGAAGT ATTCGCGCAC TATGGTCAGT GTCAACCTGT ACCTTTATTC GATAGCCAAA TTGCGGCATC TTTATGTGGT ATGGGGCATG GTGTTGGTTA TGCAAAGTTA GTTGAAACCT GTCTTGGCGA AGTGATTGAT AAAGGTGAGT CACGCACCGA TTGGATCCGC AGGCCATTAA CCGAAGCGCA ACTTGCCTAT GCCGCAAATG ATGTGTTGTA TCTGCATCAA CTTTACCCTC AGCTTGAAGC TAAATTGGTC GCTCAGGGGC GCCTAAATTG GTTATATGAG GAAGGGGTGA GGATGACGGA AGGGCGGCTA GATACGCCAG ATCTCGATAC CGCTTACTTA AAAGTTAAAA ATGCCTTTCA GTTGACTGAA ATTCAATTGG CTTACCTGAA AGTACTTGCC AAATGGCGTC TTGAAAAAGC CTTAGCACGT GATTTAGCTT TGGGATTTGT GATTAAAGAT CATGGACTGA TTGCATTAGC TAAAAAACAG CCTAAAAGTA TGACCGAGTT GCTTAAGCTA AACGACCTAA CCGAGCAGGA AAAGCGTATT CACGGTAAAG AGATTTTGCG AGTAATGCAA ACCGTGGATT TGGTCAATCT ACCAGAGCTT GTCGATGTGC TTGCACTTAA GCCGGGCTAT AAATCTGCTT TTAAGCTGAT CAAAAACTGT TTGACTGAAC TGTGTGAAAA GTATGAAGTT CCACTGGAAA TGCTAGGTTC TAAGCGACAT ATCCATGAGT ATTTACAATG GAGATGGGAC GCAGAGCAGG GCGATTTACC GATAATCTTA ACTGGGTGGC GTGGCGAAAT CGCCGCACAA TCCCTCGCAA AGCTTGACGT TTAG
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Protein sequence | MFHYVSDEVS LNALVAQYQQ SKILVLDTEF VRTRTYYAKL GLIQAYDGKT LALIDPVALP DLAKFWALLA NPNIIKLVHS CSEDLEVFAH YGQCQPVPLF DSQIAASLCG MGHGVGYAKL VETCLGEVID KGESRTDWIR RPLTEAQLAY AANDVLYLHQ LYPQLEAKLV AQGRLNWLYE EGVRMTEGRL DTPDLDTAYL KVKNAFQLTE IQLAYLKVLA KWRLEKALAR DLALGFVIKD HGLIALAKKQ PKSMTELLKL NDLTEQEKRI HGKEILRVMQ TVDLVNLPEL VDVLALKPGY KSAFKLIKNC LTELCEKYEV PLEMLGSKRH IHEYLQWRWD AEQGDLPIIL TGWRGEIAAQ SLAKLDV
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