| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1741 |
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| Symbol | |
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| ID | 5079299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1988290 |
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| End bp | 1989315 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498890 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001183265 |
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| Protein GI | 146292841 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGAG AATTATTACA AACCGCCGCA TTAAATTTAA AAAAAGCCGT TCCGCTAATG
CTCAAACATA AAATTCCCAC GACACCTGTG AATTATGCAC TCTGGTACAC CTATGTCGGG
GAGCAAAATT CAGCATTAAA TGAGCAGCTT GATACTGTTA TCGCGCAATA CAATACCTGT
CCGCCAGTGA GTAGTGAGTT GCTCTACCGC CAATATGTAG CCGATCCCGT CGAATTGGAC
GTACGAGAAA TGCGCCAAAA TTTAGATGCC ATGGTGACTG AGCTTTCGCA ATCGCTCAAA
GACACCAATC TTGATACCCA TGAGTTTCAA TCCCGTATCG AGAGCAATTT TGAGAAACTC
CATCGTATTG AAGATGAAGG TTTTAGTGTC GAGCAAGTAC TCGATTTAGT GCGGAGTTTA
GTAAAAGAAT CCGACAATAT TCGTTCTAGC ACTGAATTTT TCACCGGACA ATTACAAAAG
GCACAAACGG AAATCGATGC CCTTAAGAAA AAACTCGAAC AAACGGAAAA AGATGTACTT
TACGATGCGC TCACAGGGTG CCTTAACCGC CGCGCATTTG ATGCCGACTT CAGCGGTATG
CTAACCCAAG CTCCCGAAGG GACTTGCGTC ATTTTGGTCG ATATCGATCA CTTTAAAGTG
TTTAACGACT CCTATGGTCA CCAAATGGGC GATCAGGTAT TGCGTGCCGT TGCTAAGCGC
TTACAAGAAT CCTGCCGTGA TGGAATTAAA CTGTACCGCT TTGGCGGTGA AGAGTTCGCC
ATTCTCGTGC CTAAAAGCCA ATTACGCATT GCCCGTCAAT TGGCTGAAGC CATGCGCCGA
GGGCTTGAAA AGCTCAGCTT AAAAGACAGA CGTAAAGATG AACGCATCGA TAATATCAGT
GCCTCTTTTG GTGTCGCGCA ATGGCAAGAA AAACAAACAG GGCTTCAACT GATTGAAAAG
GCGGATAAGT TACTCTATGA AGCCAAACGA CTCGGCCGTA ATCGGGTGAT GCCAATAAGT
AACTAG
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| Protein sequence | MSRELLQTAA LNLKKAVPLM LKHKIPTTPV NYALWYTYVG EQNSALNEQL DTVIAQYNTC
PPVSSELLYR QYVADPVELD VREMRQNLDA MVTELSQSLK DTNLDTHEFQ SRIESNFEKL
HRIEDEGFSV EQVLDLVRSL VKESDNIRSS TEFFTGQLQK AQTEIDALKK KLEQTEKDVL
YDALTGCLNR RAFDADFSGM LTQAPEGTCV ILVDIDHFKV FNDSYGHQMG DQVLRAVAKR
LQESCRDGIK LYRFGGEEFA ILVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDERIDNIS
ASFGVAQWQE KQTGLQLIEK ADKLLYEAKR LGRNRVMPIS N
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