| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1739 |
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| Symbol | |
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| ID | 5079297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1985322 |
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| End bp | 1987595 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498888 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001183263 |
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| Protein GI | 146292839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.491148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACAG GGAAAAGGAT AAAAGAAGTC GTTGAAGCAG TCCTGATGGT TGTTGTCAGT
ATTGCTATTT TTTTGGGGTT ACCATTTGCA GTCCTAGCAT CGCCAAATAC AGCAGTAACC
TTATTTGGGC AACAAGATGC AGCTTCTGCA TTGGAAGTAC ACATTCCGCA GCAGCAACAA
ACATTAGATT ACGATGATAT TACTCAGGGG ATGCTGTTGT ATTTCATGCC AAATGGTGCC
TTATTGCCTT CTTTACCCCT CGATACACAG GTGTCTATGC AAGTGTCGGG CTTAAATAAT
CGCGTTAGCG TGAAGCAGAT TTTTACTAAT AACACCGAAT TTGTGTTAAA CGGCCAGTAT
TTGTTTCCTT TACCAAACGA GGCCGCAGTC GATTCGCTAC GTATGCACAT AGGTCAGCGG
GTAATCGAAG GGCAAATTCA TCCCAAAGCT GAGGCTAAGC AGATCTTTCA ACAGGCAAAA
GCTGAGGGGA AACGCGCCAG TCTTGTCAGT CAAGAACGCC CCAATATGTT TACGACTGAC
GTGGCAAACC TTGCGCCAAA TGAACAATTA GTTGTCGAAA TTAGTTACCA GGAAAACATC
AAATATGAGG ATGGCCTATT TAGTTTGCGC TTTCCTCTGG TAGTGGCGCC GCGCTATATA
CCAGGTTTCA TCCACGATAA GGCTTCTGCC AATGACAATG CGGCTAACTC GCGTGTCACC
AGTAGCGAAG TTTTTGATGC TGAACGTATC GTTGCGCCAT TAAGAAGAGC CAATAGCAAA
CAAGATCCTG TGCTTAACGC CAATATTGAG GTGCGTCTTG CTAAGGGCGT TGATAAATCA
ACCATTGCAA GTCCTTACCA TCAGATCAAG CTGGATGAGC CGCATCACGG CATCATCAAT
GTATCACTTA CCAATAGCGT GGTCGCAAAT CGTGATTTTG TGCTGCAATG GCGTGCTAAA
CAAGGCATGA GCCCAATGGC TTTAGTCTTT AATCAGCAGG GCAAAACCCA TGGCGATGGT
GCTTCTGAAG ATAACGTCTC TGAAAACCGC CAATCAGATG ATCACTACAG TCTTGTGATG
GTGTTACCAC CCAAGACTGA TGAACACGCG TTGTCCACAT TACCCCGTGA ATTAATTCTA
GTAATTGACA CCTCTGGCTC CATGGCGGGG GATTCGATAG TACAGGCCAA AAGTGCGCTT
CTCTATGCGC TTAATGGATT AAAGGCTGAA GACAGTTTTA ATATTATTGA GTTTAATTCT
GAATTGACGC AATTATCGCC AACATCATTG CCAGCAAACC AAACACATCT TGCCCGTGCA
AGGCAATTTA TTCATCGATT ACAGGCTGAT GGTGGCACAG AGATGTCGTT AGCACTGAAT
GCTGCCTTGC CTCGGGGTAT AAACCGCTTG TCGGAATCAT CTCAATCCTT GCGTCAGGTG
ATTTTTATGA CTGACGGTTC GGTGGGTAAT GAGCAAGCCT TATTTGATCT GATCCGTTAT
CAAATAGGTG AGAGTCGCTT GTTTACTGTG GGTATTGGCT CTGCGCCTAA TTCGCATTTT
ATGCAAAGAG CTGCAGAACT AGGTCGAGGT ACTTTTACCT ATATAGGTAA TGTGGATGAG
GTTGAGCAGA AGATAAGCAA GCTGCTAAGT AAAATCCAGT ATCCAGTATT AACCGATATT
AACGTGCGCT TTGACGATGG TGGGGTGCCT GATTACTGGC CATCACCCAT TCCAGATTTG
TACCGTGGTG AGCCTGTTGT TGTCAGCCTA AAACGCAGTG AGCGTGAGCC GCAGGAGTTA
GTGATCTCCG GTCGTCAGGG CCATAAAAAC TGGCAACAGT CGCTTTCCCT CAAGGACAGC
AGCGATGGAT TAATCACCAA TCAAGATGCG GGTTTAGATT TACTCTGGGC CAGAAAGCAA
ATTGCCGCAC TGGAACTCAG TAAAAATGGC GCAAACGATG ACAAAGTAAA GCAGCAGGTA
ACTGCATTAT CAATGAATTA CCACTTAGTC AGCCCTTACA CCAGTTTAGT GGCGGTAGAT
TTAACGCCTA TTGATTCCAG CGCCATGACG CGTGATGCCG TTGTACGCCA ACACTTACCC
TTAGGTTGGA AACCCTTTGG TGTATTACCA CAAACGGCCA CATCGAGTCG TTTCGATATG
CTACTTGGTG CTGTCACTTT GATATTAGCA TTGCTGTTAG CAGGCTCAAT GCTGCGTCAA
CGCCGCAAAG AGAGAGCTGT CATTCTCGCT ATCCCCTACA AACAAACATT ATGA
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| Protein sequence | MVTGKRIKEV VEAVLMVVVS IAIFLGLPFA VLASPNTAVT LFGQQDAASA LEVHIPQQQQ
TLDYDDITQG MLLYFMPNGA LLPSLPLDTQ VSMQVSGLNN RVSVKQIFTN NTEFVLNGQY
LFPLPNEAAV DSLRMHIGQR VIEGQIHPKA EAKQIFQQAK AEGKRASLVS QERPNMFTTD
VANLAPNEQL VVEISYQENI KYEDGLFSLR FPLVVAPRYI PGFIHDKASA NDNAANSRVT
SSEVFDAERI VAPLRRANSK QDPVLNANIE VRLAKGVDKS TIASPYHQIK LDEPHHGIIN
VSLTNSVVAN RDFVLQWRAK QGMSPMALVF NQQGKTHGDG ASEDNVSENR QSDDHYSLVM
VLPPKTDEHA LSTLPRELIL VIDTSGSMAG DSIVQAKSAL LYALNGLKAE DSFNIIEFNS
ELTQLSPTSL PANQTHLARA RQFIHRLQAD GGTEMSLALN AALPRGINRL SESSQSLRQV
IFMTDGSVGN EQALFDLIRY QIGESRLFTV GIGSAPNSHF MQRAAELGRG TFTYIGNVDE
VEQKISKLLS KIQYPVLTDI NVRFDDGGVP DYWPSPIPDL YRGEPVVVSL KRSEREPQEL
VISGRQGHKN WQQSLSLKDS SDGLITNQDA GLDLLWARKQ IAALELSKNG ANDDKVKQQV
TALSMNYHLV SPYTSLVAVD LTPIDSSAMT RDAVVRQHLP LGWKPFGVLP QTATSSRFDM
LLGAVTLILA LLLAGSMLRQ RRKERAVILA IPYKQTL
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