| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1736 |
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| Symbol | |
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| ID | 5079294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1980741 |
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| End bp | 1981940 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640498885 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001183260 |
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| Protein GI | 146292836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA AACATCGTCA AGCCACCCAA ATCGTCAGCT TAGGTCGAGA CAAAAAATGG
ACCAAAGGTG TGATTAATCC ACCCGTATTT CGCGCTTCGA CTATCGTCTT CGATACCATG
GAAGACATGC GCCACGCCGC AAAAAATAAA ACCAATGGCG AGATGTTTTA CGGCCGCCGT
GGCACCCCAA CCCATTTTGC CTTCCAAGCT GCGATTGCCC AATTAGAAGG CGGGGTCGGT
ACTGCGCTCT ACCCTTCAGG CGCGGCAGCG ATCAGTGCAG CGCTACTGTC CTTTTTAAAA
GCAGGCGATC ATCTGTTGAT GGTCGATAGC GTGTACGAGC CCACGCGGGA TCTCTGTACC
CATATTCTCG GTGGTTTTGG TATCGAAACC ACTTATTACG ATCCGCTGAT TGGCGCGGGC
ATAGGTGAAC TCATCCGCCC CAATACTAAG GTGTTGTTTT TAGAGTCTCC GGGCTCTATC
ACCATGGAAG TGCAAGATGT GCCAACTTTG TGCCGTATCG CCCACGAACA TGGGCTTGTC
ACTATACTAG ACAACACTTG GGCCTCGCCC ATCAACAGCA AACCTTTCGA AATGGGAGTC
GATATTTCCA TTCAAGCGGC CACTAAATAT ATTGTCGGTC ACTCGGATGT GATGATAGGC
ACCGCCACCG CTAACGAAAA ATACTGGCCG CAACTGCGTG AACACAGCTA TTTGATGGGG
CAAACTACCT CGCCAGATGA TGTATACCTT GCCGCGCGCG GCCTGCGCAC CTTAGGCGTG
CGTATGGCGC AGCATGAAAA AAATGCAATG CAAGTCGCTA ATTGGTTGAA AACCCGCCCA
GAAGTGGATC ATCTGCGTCA CCCCGCGTTT GACACATGCC CTGGGCATGA GTTCTTTAAA
CGCGACTTTA GTGCCTCAAA CGGTTTGTTT TCCTTTGTAT TAAAGCGAGG TGATGCCGAT
GCGGTCACCG CGCTGGTGGA AAATATGAGC CACTTTAAAA TGGGCTTTTC TTGGGGGGGC
TACGAGAGTC TAATTTTAGG GATTTTCGGT ATTGACAGGA TCCGCTCGGC AACGAAATGG
GATCCGAGTA AACCCTTAAT CCGTTTGCAT ATTGGTTTAG AAGATCCCGC CGATTTAATC
GCCGATCTCA GTGCTGGATT TGAACGCTTT AACGCCGTTC TGACAGCTAA AGCGAAGTAA
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| Protein sequence | MTDKHRQATQ IVSLGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR
GTPTHFAFQA AIAQLEGGVG TALYPSGAAA ISAALLSFLK AGDHLLMVDS VYEPTRDLCT
HILGGFGIET TYYDPLIGAG IGELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV
TILDNTWASP INSKPFEMGV DISIQAATKY IVGHSDVMIG TATANEKYWP QLREHSYLMG
QTTSPDDVYL AARGLRTLGV RMAQHEKNAM QVANWLKTRP EVDHLRHPAF DTCPGHEFFK
RDFSASNGLF SFVLKRGDAD AVTALVENMS HFKMGFSWGG YESLILGIFG IDRIRSATKW
DPSKPLIRLH IGLEDPADLI ADLSAGFERF NAVLTAKAK
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