| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1730 |
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| Symbol | |
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| ID | 5079288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1972030 |
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| End bp | 1972911 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498879 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001183254 |
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| Protein GI | 146292830 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAC GTCAACTCAA ACATTTAGAC GCCCTTGCTA ACACTGGCAG CTTTACTGCT
GCGGCTAAAA AACTCAATAT GGCGCAACCT GCGCTCAGTC AGAGTATTAA ACGTCTTGAG
CAATCCCTAG GTGTTACCTT AATCAATCGT ACTAGCCATA AAAATGACAA ACTACTGGCC
CTCACCGCTG AAGGTTTAGT ACTCCATCAA CATGCCACGC TTATCCTAAA GCAAATCAAA
CAGGCCGAGG CACAAATCCA TGCAATGGCC AATCTCACCT CGGGTGAAGT GCGTATTGCA
GTGCCGGGTA TGCTCGGTTC CTTCTATTTA CCCTCGCGGT TAATGGCCTT TCGCCATCAA
TACCCCGAGC TAAAACTGTC ACTGTTTGAA GGCGGCACCC GCGATGCACT ACGTATGTTA
CAGCAAGAAG AAGTGGATAT TGCGATTATT ACCGCCCAAG ATCTACAGAG TGATTTTGAC
AGTCAACTGT TAATCCGTGA ACAAATGGTG ATTGCAATGG GGACAGAACA TCCATTAGCA
GAACACAATG CTGTTAGCTT GAGCGATTTT TTTGACCATG AATTAGTGAT GTTTAAGACA
GGTTATTTTC ACCGTGAATG GATACTGTCA CAGGCAAAAG TGTTAGGAAA AAAGCCCAAT
ATTGCCTTTG AAACCAATCT GATTAACTTG ATAAAACAAA TTGTATCCCA AGGCTTTGGT
ATCACCAGTG TGCTGGAAAT GGCGATCAGC CCGAAGGACG ATATTTTAGC TAAACCCTTC
GATCCACCCG TCTTTTTAAA TCTGCATATT GCGTGGAAAA AACAGCGTCC AGTCAGTCAA
GCCGACCGTG CTTTTGTCGA GTTTCTGATG AAGAATCGCT AA
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| Protein sequence | MDIRQLKHLD ALANTGSFTA AAKKLNMAQP ALSQSIKRLE QSLGVTLINR TSHKNDKLLA
LTAEGLVLHQ HATLILKQIK QAEAQIHAMA NLTSGEVRIA VPGMLGSFYL PSRLMAFRHQ
YPELKLSLFE GGTRDALRML QQEEVDIAII TAQDLQSDFD SQLLIREQMV IAMGTEHPLA
EHNAVSLSDF FDHELVMFKT GYFHREWILS QAKVLGKKPN IAFETNLINL IKQIVSQGFG
ITSVLEMAIS PKDDILAKPF DPPVFLNLHI AWKKQRPVSQ ADRAFVEFLM KNR
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