| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1727 |
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| Symbol | |
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| ID | 5079285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1969652 |
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| End bp | 1970593 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498876 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001183251 |
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| Protein GI | 146292827 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCG ATAAGAAAGT GGCACTGATC ACCGGAGCGG GTTCAGGACT TGGCCGAGCT
TACGCTATTA TGCTGGCAGA GCGGGGTGCA AAAGTCGTAC TTATCGATCA ACCTACAGTT
CACTGTGCTG AAGTCAGTAC AGATGCTCAA TCTGTTACTC ACTCCATCAA TGACAACTTG
AATCAAACAT ATGATAGTAT TATTAAATTA GGTTGTGACT GCCTCCAGTT TGTCCTCGAT
GTGAGTGACA AAGCGGCTGT AGATCGTATG GTTGATACCG TCGCGAAAAG CTGGCAACGG
ATTGATATTT TAATTAATAA CGCGGGTATT TATGGGGCGT GTGCCTTTGA AAGGATCACA
CCAGAACAAT GGCAGCGACA GTTAGATGTG GATTTAAATG GCAGTTTTTA TTTGACTCAA
GCGGTATGGC CATTAATGAA ATTGCAAAAC TATGGCCGTA TTGTGATGAC CACAGGAGTA
TCCGGGTTAT TTGGTGATTT ACATCAAGTC GGATTTAGTG CAGCCAAAAT GGCTCTAGTT
GGTATGGTTA ACAGTCTGTC TATCGAAGGA GAAATGCACA ATATTCGAGT GAACAGCCTA
TGCCCACAGG CGGTCACAGC AATGACAGAA AAACATTTGG CAACAGCAAT TCAACCCTTA
TTTTCCTTCG ATACCCTGAC CGCCACGACC GCTTTTTTAG TCAGCGAACA TGCACCCAAC
GGCCAGCATA TTTTGGCGGG GGCAGGGAGT GTCAGCCATG GCATGTTTGC TGAGTTTTTG
CCGATGTATT TTTGTGAAGG ATTATGCACA CCCCATAAAT TGGCTCAATG TTGGCATCAA
ATTTATCAAG CGTTTCCCGT GAGTTTACAT GCTTGTGGTG AGGATAAAGT GCTTTCTTGG
TCAAAGCTCA GCGCATTAGA GCACGATATT AAAATTGATT AG
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| Protein sequence | MRFDKKVALI TGAGSGLGRA YAIMLAERGA KVVLIDQPTV HCAEVSTDAQ SVTHSINDNL
NQTYDSIIKL GCDCLQFVLD VSDKAAVDRM VDTVAKSWQR IDILINNAGI YGACAFERIT
PEQWQRQLDV DLNGSFYLTQ AVWPLMKLQN YGRIVMTTGV SGLFGDLHQV GFSAAKMALV
GMVNSLSIEG EMHNIRVNSL CPQAVTAMTE KHLATAIQPL FSFDTLTATT AFLVSEHAPN
GQHILAGAGS VSHGMFAEFL PMYFCEGLCT PHKLAQCWHQ IYQAFPVSLH ACGEDKVLSW
SKLSALEHDI KID
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