Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1725 |
Symbol | |
ID | 5079283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1967422 |
End bp | 1968234 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498874 |
Product | extradiol ring-cleavage dioxygenase III subunit B |
Protein accession | YP_001183249 |
Protein GI | 146292825 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTA ACGCGAGTCG TATGCCTGTG CTATTTGTGC CCCACGGTGG TGGCCCTATG CCTTTGCTCA ATGATGTTAA TCATCGGGAG TTGCGTGCAT TTTTAACTTC AGTGACAGCG CCAATGCCCA CTCCGAAGGC GATTGTGTTG ATCACTGCCC ATTGGGAAGA ATCTGTGGTG ACTTTGTCGA GTAGCCCAAA GCCAAGTATT TTGTATGATT ACTATGGATT TCCACCTGAG GCTTATCAGC TGACATATCC TGCACCCGGT GAGCCAGAAT TAGCCGAACA GATTGCGAAT ATGCTAGCGG ATAAGGGCAT CGCCGCCCGC TTAGATAGCG AACGCGCATT TGATCACGGT ACCTTTGTAC CACTTAAGTT GATGTATCCT GAAGCGAATA TTCCCGTGGT GCAGATGTCG TTAGTCCACA GCCTCGATCC TAAAATCCAT ATAGCGATTG GGGAGGCTTT AGCGCCGCTG CGGAACCAAG GGGTGTTGAT CGTGGGGTCT GGCATGTCGT TTCACAATAT GCGGGCATTT TTCTCAAGCG ATCTCACAGT GCAAAGCCGC AGCGCAGAAT TTGATCATTG GTTGACGCAA ACTTTAACGG CAAGTGATAG TGCTGCCGAG GTAAAAACAG CGTTAACTCA TTGGCAATCA GCCCCTGAAG CGCGTTTTAG TCATCCGCGG GAAGAACATT TATTACCGCT ACATGTGTGT TTTGGTGCAG GCCATCATGG TTCATCCCAT GCCGAACGTA ACTTTAATGG TATTTTGTTA AACACGCTGA TCTCTGGTTA TATCTGGCAA TAA
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Protein sequence | MQVNASRMPV LFVPHGGGPM PLLNDVNHRE LRAFLTSVTA PMPTPKAIVL ITAHWEESVV TLSSSPKPSI LYDYYGFPPE AYQLTYPAPG EPELAEQIAN MLADKGIAAR LDSERAFDHG TFVPLKLMYP EANIPVVQMS LVHSLDPKIH IAIGEALAPL RNQGVLIVGS GMSFHNMRAF FSSDLTVQSR SAEFDHWLTQ TLTASDSAAE VKTALTHWQS APEARFSHPR EEHLLPLHVC FGAGHHGSSH AERNFNGILL NTLISGYIWQ
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