Gene Sputcn32_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1725 
Symbol 
ID5079283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1967422 
End bp1968234 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content48% 
IMG OID640498874 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_001183249 
Protein GI146292825 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTA ACGCGAGTCG TATGCCTGTG CTATTTGTGC CCCACGGTGG TGGCCCTATG 
CCTTTGCTCA ATGATGTTAA TCATCGGGAG TTGCGTGCAT TTTTAACTTC AGTGACAGCG
CCAATGCCCA CTCCGAAGGC GATTGTGTTG ATCACTGCCC ATTGGGAAGA ATCTGTGGTG
ACTTTGTCGA GTAGCCCAAA GCCAAGTATT TTGTATGATT ACTATGGATT TCCACCTGAG
GCTTATCAGC TGACATATCC TGCACCCGGT GAGCCAGAAT TAGCCGAACA GATTGCGAAT
ATGCTAGCGG ATAAGGGCAT CGCCGCCCGC TTAGATAGCG AACGCGCATT TGATCACGGT
ACCTTTGTAC CACTTAAGTT GATGTATCCT GAAGCGAATA TTCCCGTGGT GCAGATGTCG
TTAGTCCACA GCCTCGATCC TAAAATCCAT ATAGCGATTG GGGAGGCTTT AGCGCCGCTG
CGGAACCAAG GGGTGTTGAT CGTGGGGTCT GGCATGTCGT TTCACAATAT GCGGGCATTT
TTCTCAAGCG ATCTCACAGT GCAAAGCCGC AGCGCAGAAT TTGATCATTG GTTGACGCAA
ACTTTAACGG CAAGTGATAG TGCTGCCGAG GTAAAAACAG CGTTAACTCA TTGGCAATCA
GCCCCTGAAG CGCGTTTTAG TCATCCGCGG GAAGAACATT TATTACCGCT ACATGTGTGT
TTTGGTGCAG GCCATCATGG TTCATCCCAT GCCGAACGTA ACTTTAATGG TATTTTGTTA
AACACGCTGA TCTCTGGTTA TATCTGGCAA TAA
 
Protein sequence
MQVNASRMPV LFVPHGGGPM PLLNDVNHRE LRAFLTSVTA PMPTPKAIVL ITAHWEESVV 
TLSSSPKPSI LYDYYGFPPE AYQLTYPAPG EPELAEQIAN MLADKGIAAR LDSERAFDHG
TFVPLKLMYP EANIPVVQMS LVHSLDPKIH IAIGEALAPL RNQGVLIVGS GMSFHNMRAF
FSSDLTVQSR SAEFDHWLTQ TLTASDSAAE VKTALTHWQS APEARFSHPR EEHLLPLHVC
FGAGHHGSSH AERNFNGILL NTLISGYIWQ