| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1724 |
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| Symbol | |
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| ID | 5079282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1966186 |
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| End bp | 1967076 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498873 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001183248 |
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| Protein GI | 146292824 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTTAG ACCAACTGCT GATGTTTAGA ACCGTAGCTG AGGCGGGCTC ACTCAAAGCT
GCCAGTAACA AGCTACATAA AACCCAACCC GCCATTAGCC AAAGTATCAA ACAGTTAGAA
TCCCAACTCG ATCTTATCCT GTTTAATCGT GAAGGTTATC GACTCGCCAT CACAGAACAA
GGTCGAAAAC TGCTGCAACA TACCCTGCGG GTACTGAATG AAGCGCAAGA AATGAAGCAA
GTAGCGAAGC ATTTAGCCAA AGGTAACGAA GCAAGCATCA CCTTAGCTTT TGAAGCCTCC
TTTAATCTCG CTCGAATTTT GCCGATTTTA GAGCTGACTC AAAATGAGTT TCCTTATACC
CAAATTATTC TCAAACAAGA GTTTTTAACT GGTGCACTCG AAGCGCTAAA TCAAGATAAA
GCTGAAATCA TCATCTCTGC GGGCGGAATT GAACCCATAC GTTCGAGCCA TTTAGAATTA
GCCTATTTAT TTTCAGGTAG CCTTCTCGAT GTTGCCGCAC CGCGCTTACT CAGCCGTTAT
CCCAACCTAA GCCATGTACG GGAGTTAGTG AACGAATACC AAATCGTGAT CCAAGATACA
GGGACGGGAA CAGCCAATAT TGAATTTGGG GTACAGGCGG GGCAACGACG TTGGTATGTT
AATGATTTTT ATACCAAGAA AATGCTTATT CAAAGTGGTA TGGGCTGGGG CAAGCTGCCG
CACTATATGA TTGAAGATTC ACTCAAACAG GGCGCATTGA TTGCACTGGA TCTGCGTGAA
AGACAAAATA ATATTCAACT CGATTACTAT GTGATGCGAA AACCCCACTC ACCTTTAGGC
CCCGTGGCAC AAGCACTCTG GCAAAAGCTG ATCGCCTTTT CATTGAGCTG A
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| Protein sequence | MTLDQLLMFR TVAEAGSLKA ASNKLHKTQP AISQSIKQLE SQLDLILFNR EGYRLAITEQ
GRKLLQHTLR VLNEAQEMKQ VAKHLAKGNE ASITLAFEAS FNLARILPIL ELTQNEFPYT
QIILKQEFLT GALEALNQDK AEIIISAGGI EPIRSSHLEL AYLFSGSLLD VAAPRLLSRY
PNLSHVRELV NEYQIVIQDT GTGTANIEFG VQAGQRRWYV NDFYTKKMLI QSGMGWGKLP
HYMIEDSLKQ GALIALDLRE RQNNIQLDYY VMRKPHSPLG PVAQALWQKL IAFSLS
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