Gene Sputcn32_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1720 
Symbol 
ID5079278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1961101 
End bp1961505 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID640498869 
ProductMerR family transcriptional regulator 
Protein accessionYP_001183244 
Protein GI146292820 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CACACACAGT ACAAACAACG TACTCGATTA GTGATCTCTC AAAAGAATTT 
GATATCACCA CACGGAGCAT TCGTTTCTAC GAAGACCAAG GCTTGCTTAA GCCGAAACGT
CGCGGTCAAA CCCGTATTTA CAGTCTTAAG GACAGGGTTC GACTCAAACT TATTCTGCGC
GGCAAGCGCC TTGGGTTCTC CCTTGCGGAG ACCCGACGCC TGTTCGAACT TTACGATGCC
GATAAGAGCA GCACCACTCA GCTCAATACC ATGCTTGCCC TCGTGGAAGA GAAAAAATCC
GCCCTACAAC AGCAAATGGA CGACATCAAA GTGGTCCTGA TGGAGCTAAA TTCGGCCGAG
CAGCAATGCC GCCTCGCCCT AGAAGAAAGC AAGACCAAGG CCTAA
 
Protein sequence
MSATHTVQTT YSISDLSKEF DITTRSIRFY EDQGLLKPKR RGQTRIYSLK DRVRLKLILR 
GKRLGFSLAE TRRLFELYDA DKSSTTQLNT MLALVEEKKS ALQQQMDDIK VVLMELNSAE
QQCRLALEES KTKA