| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1713 |
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| Symbol | |
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| ID | 5079371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1952587 |
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| End bp | 1953243 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640498862 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001183237 |
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| Protein GI | 146292813 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTAT CAAGAGAACA ACTTGCTCAG CGCGTAGCCA AAGAATTACA AGACGGCTAC
TACGTCAACC TCGGTATTGG TATTCCCACG CTAGTGGCCA ACTACATTCC CGCAGGCATG
GAAGTCATGT TGCAATCGGA AAACGGCCTA CTCGGCATGG GTGAATTCCC AACCGAAGAC
ACCATAGATC CCGATTTAAT TAACGCGGGT AAACAAACCG TTACCGCCGT GAAAGGCGCG
TCGTTTTTCT CTTCAGCCGA GAGCTTTGCC ATGATCCGTG GCGGCCATGT GGACTTAACC
GTACTCGGCG CCTTTGAAGT CGATGTGAAC GGCTCTATCG CCTCATGGAT GATCCCCGGC
AAGCTCATCA AGGGCATGGG CGGCGCGATG GATTTAGTCG CGGGCGCCGA AAACATTATC
GTGACTATGA TGCACGCCGA TAAATACGGC AATTCTAAGC TGCTACCCGT GTGCGAATTG
CCGCTAACAG GCTACGGCTG TATCAAACGT GTAGTCACCG ATTTAGCCTT TATCGAAATT
AAAGATGGCG CATTCCATCT GTTAGAACGT GCGCCCGGTG TCAGTGTTGA AGAAATTGTT
AGCAAAACCG CTGGCAAATT AATCGTACCA GACCATGTAC CAGAGATGGT GTTTTAA
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| Protein sequence | MALSREQLAQ RVAKELQDGY YVNLGIGIPT LVANYIPAGM EVMLQSENGL LGMGEFPTED
TIDPDLINAG KQTVTAVKGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVN GSIASWMIPG
KLIKGMGGAM DLVAGAENII VTMMHADKYG NSKLLPVCEL PLTGYGCIKR VVTDLAFIEI
KDGAFHLLER APGVSVEEIV SKTAGKLIVP DHVPEMVF
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