Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1708 |
Symbol | |
ID | 5079366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1948912 |
End bp | 1949670 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640498857 |
Product | hypothetical protein |
Protein accession | YP_001183232 |
Protein GI | 146292808 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.605822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTGGC TTATTATTGC ACTCGCTGGC TTTTTAGGCG GCATGCTCAA TGCAGTTGCC GGTGGTGGCA GTTTTATTAC CCTATTAGCG TTAGTGTTTG TCGGGGTTCC ACCGATTGCG GCGAATGCCA CGGGGACTGC CGCGCTACTG CCCGGTTATA TCGCCAGCGC ATGGCGTTTT AGAAAGGATA TCGAATATCC GGCGAGTCTT AGCCTTAAGG ATCTGATCTT AATTGCTTTA ATCGGCGGCA GTATTGGCGC AGGTATTTTG CTGACCACCA GCGAGCAAGT CTTCGCAAAA CTGATCCCTT GGCTGATTCT ACTGGCCACC GCGGCCTTTA TTGTTGGCCC TTGGTTGCTC AAACGAAGAA TCACTGAGCA AGGCGAAAAC ACCTCTACGC CAATGTTAAG TCCGATAATG GCACTGATGC TACTAGCGGC TGTGTGTATC TATGGCGGTT ATTTCAATGG TGGCTTAGGT ATTATTCTGC TGGCGAGTTT TGGTCTAATG GGGCAAACCA ACCTACATGG GATGAACGGG CTTAAAAATC TGATTTCTGC CCTGCTTACC ACGATTGCAG TGGTGATTTA TGCGGCAGGA GATGCTATCG ATAGCCAGTA TCTGTTGCTG CTTGCTGTTA TGGCAATTAT CGGTGGTTAT GTCGGCGCGG CAATGGCTTA TCGTATTTCA CAGCCCCTGT TACGCGGTTT TATTGTGATC GTCGGTCTAG CGATGGCGCT CGGCTTTTTT ATCCGCTAA
|
Protein sequence | MDWLIIALAG FLGGMLNAVA GGGSFITLLA LVFVGVPPIA ANATGTAALL PGYIASAWRF RKDIEYPASL SLKDLILIAL IGGSIGAGIL LTTSEQVFAK LIPWLILLAT AAFIVGPWLL KRRITEQGEN TSTPMLSPIM ALMLLAAVCI YGGYFNGGLG IILLASFGLM GQTNLHGMNG LKNLISALLT TIAVVIYAAG DAIDSQYLLL LAVMAIIGGY VGAAMAYRIS QPLLRGFIVI VGLAMALGFF IR
|
| |