| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1703 |
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| Symbol | |
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| ID | 5079361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1941317 |
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| End bp | 1942414 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498852 |
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| Product | NlpB/DapX family lipoprotein |
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| Protein accession | YP_001183227 |
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| Protein GI | 146292803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000363681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGA AAGTCACCCC ACTGATCTTA GTCGCTGCCG TTGCGGCCTG TTCCTCACCA
CTTGAACGTC GTCAAGCAAA CGGTGGCGAT GACTATGTTC AGGCTGAGCA AGCGCCAATG
CTTAAAATCC CAGAGGGATT AAAGACGCCA CCTTACAATA AAGAATATGA AGTGCCAGCG
TTAGGCGCTA AAGCGAATAC TGCGCTTATT GGTAAAACCC TTGATATTCG TCCACCATTG
CAAGTACTGC CAATGGCTGA AGGTACCCAT GTTGAAGAGG GTAGCGATAA TATCAAAATC
GTGGTTGAGT CTATCGACAA TTCAGCAGAC CTAAAGCAAG AGATCTTTGC TAACTTAGAT
GGTTTCTTAG CAAAGCAAGC GATCCCTGTT CGTAGCCGTG ATTTTGATAA GAGCAATATC
GAAACCGACT GGATCGAAAG CCGTGAAGTG ATTGAATCGA GCCTGTGGGG GGCGGATAAA
GTCTATCTGT TACGCCAACG CTATCGTTTC GATGTGGAAA CCCGTCCACA TGGCCGTACG
GCAAGTATCG TTATTCACTT AGTTGAACAT GAAGAGTTTT ACGACGATAA AGCCCAAGAA
GTGTTATTAA GTGGTGAAGA TAAACAAAGA TACACCATTG ATATGCTTAA CAGCGCTATC
GCTTATATGA GCGTTAAACG TGAGCAAGCA ATCCAAGCCA ATCGCTTAAA GCAAACATTA
GGGATCAATG TTGATCTCGT GACACCAGAG GCGGGAGCCG CCTATTGGTC AGCTAAAGCA
CCTTATAAGC AAGTGTGGGA TCGTTTGCGT ATCGTACTCC CTGAAATGGG GTTTGAAATT
GCCGATATGG ATAGTACGAA AGGATTGTAC TTCATCAAGT TTACGGATAA TTCGGGTTTC
TGGAGTTCGC TCTGGAGCAG TAACAAGGTA TCGCTAAAAG AGGGCAGTTA TCGTTTACTG
CTGGAAGATG GTGATACACC TGAAGAGACC AAATTATTCC TACGTGATGG TGATGACCAA
CCATTAGCGA ATGATGTTGT GTCTAATATC AACCAATCAT TGACAGATTT GATGAGAGAA
GAACGTAAGC TACGCTAA
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| Protein sequence | MLKKVTPLIL VAAVAACSSP LERRQANGGD DYVQAEQAPM LKIPEGLKTP PYNKEYEVPA
LGAKANTALI GKTLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNSAD LKQEIFANLD
GFLAKQAIPV RSRDFDKSNI ETDWIESREV IESSLWGADK VYLLRQRYRF DVETRPHGRT
ASIVIHLVEH EEFYDDKAQE VLLSGEDKQR YTIDMLNSAI AYMSVKREQA IQANRLKQTL
GINVDLVTPE AGAAYWSAKA PYKQVWDRLR IVLPEMGFEI ADMDSTKGLY FIKFTDNSGF
WSSLWSSNKV SLKEGSYRLL LEDGDTPEET KLFLRDGDDQ PLANDVVSNI NQSLTDLMRE
ERKLR
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