Gene Sputcn32_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1699 
Symbol 
ID5079357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1938395 
End bp1939036 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID640498848 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001183223 
Protein GI146292799 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.333091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGG CATTTATACA GGGTATGGGA ATTGGTGGGA GTTTGATTAT TGCCGTGGGT 
GCACAAAATG CTTTTGTGCT AAAGCAGGGG ATTAAAGGCA CTTATTCTTT ACCCATTGCG 
TTACTCTGTT CTGTTATTGA TGCATTAATG ATCACCGCAG GTGTGGCTGG GCTTGGACAT 
ATTATTGAGA CATTTCCGAT AATTAAGCAT GTGGCAAGTT TTGGTGGTGC GGCATTTTTA 
CTCTGGTATG GCACCAATGC ATTAAAGGCC TCTTTTGTCG ATAAGGGGAT GGAAATGGAT 
AAAGCTGAGA ATGCCGATAC CCTAAGAAAA GCCATTCTGA CGACACTCGG GATCAGTTTT 
CTTAACCCAC ATTTATATTT AGATACCGTT GTTTTACTGG GTAGCATTAG CACACAGTTT 
GATGATTTTG CTCGGCCTTG GTTTGGTGCT GGCGCGGTAT TAGCCTCATT TATTTGGTTT 
TTTAGCTTAA GTTTTGGAGC GCGTTTACTT GCACCTATTT TTAGTCGTCC CGCAGCATGG 
CGTTACCTAG ACCGCTTTAT TTGGTTAACG ATGTGGAGTA TTGCTGCGGC AATTATTTGG 
CCTTATTTAT CCGTTTTTTC ATCATTACAC ATGATATTTT AG
 
Protein sequence
MQAAFIQGMG IGGSLIIAVG AQNAFVLKQG IKGTYSLPIA LLCSVIDALM ITAGVAGLGH 
IIETFPIIKH VASFGGAAFL LWYGTNALKA SFVDKGMEMD KAENADTLRK AILTTLGISF 
LNPHLYLDTV VLLGSISTQF DDFARPWFGA GAVLASFIWF FSLSFGARLL APIFSRPAAW 
RYLDRFIWLT MWSIAAAIIW PYLSVFSSLH MIF