| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1682 |
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| Symbol | nhaB |
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| ID | 5079340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1918678 |
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| End bp | 1920264 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640498831 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_001183206 |
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| Protein GI | 146292782 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000237317 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTGA CAATGAGTCA GGCGTTTATT GGAAACTTCC TAGGGAATTC TCCTAAGTGG
TACAAAATCG CGATACTGTC TTTTTTAATC ATTAATCCAA TACTCTTTTT CTATGTCAGT
CCTTTTGTGG CTGGTTGGGT ATTAGTACTT GAGTTTATTT TTACCTTGGC CATGGCATTA
AAATGCTATC CATTACAACC CGGTGGTTTA CTGGCCATTG AGGCTGTGGC TATCGGTATG
ACTTCTGCAA ACCAAGTGCT GCATGAAATA GAAGCAAACC TTGAAGTGTT ATTACTACTG
GTCTTTATGG TTGCTGGTAT TTATTTCATG AAGCAATTGC TGTTGTTTGC TTTTACCAAG
ATTATTACCA AAGTACGCTC CAAAATTTTA GTCTCATTAA TGTTCTGTCT AACCTCTGCA
TTTCTATCTG CGTTTTTAGA TGCCTTAACC GTTATTGCGG TTATCATTGC CGTTGCAGTG
GGTTTTTACG CGATTTACCA CAAGGTGGCA TCCGGTAAAG ATTTCTCTGC TGTACATGAC
CATACCTCAG AAAGTAATAA TCAATTAAAT AACAGTGAGC TCGAGTCATT CCGAGGATTT
CTACGTAATT TATTAATGCA TGCAGGTGTT GGTACCGCCT TAGGTGGCGT GTGTACTATG
GTTGGTGAAC CACAAAACTT AATTATCGCC GCCCAAGCTA ACTGGCAGTT TGGTGAATTC
GTTATTCGCA TGTCTCCTGT GACAGTACCA GTACTGATCG CAGGTATTCT GACTTGCCTA
CTCGTGGAGA AATTCCGTAT TTTTGGTTAT GGTGCCAAAC TCCCTGATGC AGTTCATAAA
ATTCTTTGTG ATTATGCTGC CCATGAAGAT GCACACCGTA CCAATAAAGA TAAGATGAAG
CTTGTCATTC AAGTATTAGT AGGTGTGTGG TTAATTGCAG GCTTAGCGTT GCATTTAGCT
TCTGTTGGTT TAGTGGGTTT ATCGGTGATT ATTTTAACCA CAGCTTTCAA CGGTATCACC
GATGAGCATG CTCTGGGTAA AGCCTTTGAA GAAGCACTTC CATTCACTGC ACTATTGGCA
GTATTTTTTG CTGTTGTTGC CGTCATTATT GATCAACATT TATTTGCGCC AGTCATCCAA
TGGGCATTGA GTTATGAAGG AAATACCCAA TTAGTTATTT TCTATATTGC TAACGGTTTA
CTTTCAATGG TGAGCGATAA CGTGTTTGTG GGTACGGTTT ATATCAACGA AGTCAAAGCA
GCCTTGATTG ATGGTCAAAT TACCCGTGAT CAATTCGATC TGCTCGCTGT TGCAATTAAC
ACTGGTACTA ACCTACCTTC TGTAGCGACA CCCAATGGAC AAGCCGCGTT CTTGTTCTTA
CTCACCTCAG CATTAGCGCC ACTGATTCGG TTGTCTTATG GCAGAATGGT GTGGATGGCT
CTACCCTATA CAATCGTACT GTCAGTTGTA GGTGTATTAG CTATTGAGAC AGGCTTCTTA
GAGCAAGCAA CGCAATACTT CTATGACTCG CATATGATTA TTCATCACAG TGCTAAAGAC
GTTATCGCCC CCCTGACAAG TCACTAA
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| Protein sequence | MPLTMSQAFI GNFLGNSPKW YKIAILSFLI INPILFFYVS PFVAGWVLVL EFIFTLAMAL
KCYPLQPGGL LAIEAVAIGM TSANQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFAFTK
IITKVRSKIL VSLMFCLTSA FLSAFLDALT VIAVIIAVAV GFYAIYHKVA SGKDFSAVHD
HTSESNNQLN NSELESFRGF LRNLLMHAGV GTALGGVCTM VGEPQNLIIA AQANWQFGEF
VIRMSPVTVP VLIAGILTCL LVEKFRIFGY GAKLPDAVHK ILCDYAAHED AHRTNKDKMK
LVIQVLVGVW LIAGLALHLA SVGLVGLSVI ILTTAFNGIT DEHALGKAFE EALPFTALLA
VFFAVVAVII DQHLFAPVIQ WALSYEGNTQ LVIFYIANGL LSMVSDNVFV GTVYINEVKA
ALIDGQITRD QFDLLAVAIN TGTNLPSVAT PNGQAAFLFL LTSALAPLIR LSYGRMVWMA
LPYTIVLSVV GVLAIETGFL EQATQYFYDS HMIIHHSAKD VIAPLTSH
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