Gene Sputcn32_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1670 
Symbol 
ID5079328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1902453 
End bp1903493 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID640498819 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_001183194 
Protein GI146292770 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCG AACTCAATCC ACTGGGCTTA TTAGGTATCG AATTCACGGA ATTCGCCAGC 
CCTGATACCG ATTTTATGCA CAAAGTCTTT ATCGACTTTG GTTTTTCACT GCTGAAAAAA 
GCCAAGCATA AAGACATTCT GTACTACAAA CAGAATGATA TTAATTTTCT GCTCAACACT 
GAGCGCGAAG GTTTCTCTGC TAAGTTTGCT AAATCCCACG GCCCAGCCAT TTGTTCCATG 
GGCTGGCGGG TAGAAGATGC CAGCTTTGCC TATCGTGTTG CCGTTGAACG TGGTGCAAAA 
CCCGCCGATG ATGCCAATAA AGATCTGCCT TATCCTGCGA TTTACGGCAT TGGCGACAGC 
TTAATTTATT TCATCGACAC CTTCGGTGCA GATAACAATA TCTATGCCAC TGATTTTGAA 
GATTTAGATG AGCAAATTAT CACTCAAGAG AAAGGCTTTA TCGAGGTCGA TCACTTAACC 
AACAACGTCT ACAAAGGCAC AATGGAACAT TGGGCTAACT TCTATAAAAA CATTTTTGGT 
TTTACTGAGG TGCGTTACTT TGACATCAGC GGCGTACAAA CCGCGCTAGT GTCCTACGCC 
CTGCGCTCAC CCGATGGCAG CTTCTGTATC CCGATTAACG AAGGTAAAGG CAGCGATAAA 
AACCAAATCG ATGAATATCT GAAGGAATAC AATGGCCCAG GTGTGCAGCA TTTAGCCTTT 
AGAAGCCGCG ATATCGTTAA ATCCTTAGAT GCGATGGAAG GCAGCTCAAT CCAATGCCTA 
GACATCATCC CTGAATACTA CGACACTATT TTCGATAAAG TGCCACAAGT CACTGAGAAT 
CGTGAGCGCA TTAAACATCA CCAAATTCTG GTGGATGGTG ATGATACAGG CTATTTACTG 
CAGATATTTA CTAAAAACCT GTTTGGACCG ATTTTCATTG AAATTATCCA ACGTAAGAAT 
AACTTAGGTT TTGGTGAAGG CAACTTTACT GCCCTGTTTG AATCAATTGA ACGGGACCAA 
ATGCGCCGCG GCGTTCTATA A
 
Protein sequence
MASELNPLGL LGIEFTEFAS PDTDFMHKVF IDFGFSLLKK AKHKDILYYK QNDINFLLNT 
EREGFSAKFA KSHGPAICSM GWRVEDASFA YRVAVERGAK PADDANKDLP YPAIYGIGDS 
LIYFIDTFGA DNNIYATDFE DLDEQIITQE KGFIEVDHLT NNVYKGTMEH WANFYKNIFG 
FTEVRYFDIS GVQTALVSYA LRSPDGSFCI PINEGKGSDK NQIDEYLKEY NGPGVQHLAF 
RSRDIVKSLD AMEGSSIQCL DIIPEYYDTI FDKVPQVTEN RERIKHHQIL VDGDDTGYLL 
QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFESIERDQ MRRGVL