Gene Sputcn32_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1669 
Symbol 
ID5079327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1901668 
End bp1902291 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content51% 
IMG OID640498818 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001183193 
Protein GI146292769 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATT TTGCCTTACT CGCTGTGTTT ATCCCGACTT TTTTCTTTGT TTCTATCACG 
CCTGGCATGT GCATGACACT CGCCATGACG CTAGGTATGA GCATAGGTGT GCGCCGCACC 
CTATGGATGA TGTTAGGTGA ACTCATTGGC GTAGCATTAG TCGCCACCGC CGCCGTGATG 
GGGGTTGCCA GTATCATGCT CAACTACCCC GAAGTATTTC AAATCTTTAA GTGGGTTGGC 
GGCATTTATT TAGGCTATAT CGGCGTACAA ATGTGGCGCG CCCGCGGTAA GATGGCCATA 
TTAAGCGATG ATGACACCAA CCCCAGAGCC AGCAGTTTCA CCTTGATTTC CCAAGGCTTT 
ATTACTGCTA TTGCCAATCC TAAAGGTTGG GCATTTATGG TGTCGCTACT GCCGCCTTTT 
ATCAATGCCG AGCGCGACGT CGCGCCGCAG CTCCTCGCCT TGCTGAGCAT TATTATGGTG 
ACCGAATTTA CCTCAATGCT CGCCTATGCC AGCGGCGGTA AAACCCTCCG ACTCTTCCTG 
AGCCGTGGGG ATAATATTCG CTGGTTAAAC CGGATTGCAG GCAGCCTAAT GATAGGTGTA 
GGAGTTTGGT TAGCCATGAG CTAA
 
Protein sequence
MPDFALLAVF IPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMLGELIG VALVATAAVM 
GVASIMLNYP EVFQIFKWVG GIYLGYIGVQ MWRARGKMAI LSDDDTNPRA SSFTLISQGF 
ITAIANPKGW AFMVSLLPPF INAERDVAPQ LLALLSIIMV TEFTSMLAYA SGGKTLRLFL 
SRGDNIRWLN RIAGSLMIGV GVWLAMS