Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1656 |
Symbol | |
ID | 5079404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1887390 |
End bp | 1887785 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498805 |
Product | hypothetical protein |
Protein accession | YP_001183180 |
Protein GI | 146292756 |
COG category | [R] General function prediction only |
COG ID | [COG5633] Predicted periplasmic lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0458659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATA TCTACACAGG GTTAATCATG GCTGCAGCGC TTACGCTTGG TGCTTGTGCC TCAAATACGG CGGGTATTTC GGTAAGCTCA CAAGGTGAGA CTCGTGTTGA TAGTAGCAGT TTTGCTCGTA AAATTGCGAT CGAAAATATT GATGCGCGCC GTGTAGGTGA TTTAATTCAA GGCTCTGCAT TGATTGTGAG TAAAACCTCT AGCGATATGC GCGTGCAGTA TAAATTCACT TGGTACGATG CCAGCGGCTT TACTATTGAA GATGAGGCAA CAAGCTGGAA ATCGGTGAAA TTGCACGGTA AACAGCAATT GCAGGTGTCG GCTGTGGCGC CGAACGCCCA AGTGGTGAAA TTTGACGTTT ATGTGCGCGA GACCTATTCA AATTAG
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Protein sequence | MKHIYTGLIM AAALTLGACA SNTAGISVSS QGETRVDSSS FARKIAIENI DARRVGDLIQ GSALIVSKTS SDMRVQYKFT WYDASGFTIE DEATSWKSVK LHGKQQLQVS AVAPNAQVVK FDVYVRETYS N
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