Gene Sputcn32_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1656 
Symbol 
ID5079404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1887390 
End bp1887785 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content46% 
IMG OID640498805 
Producthypothetical protein 
Protein accessionYP_001183180 
Protein GI146292756 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0458659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATA TCTACACAGG GTTAATCATG GCTGCAGCGC TTACGCTTGG TGCTTGTGCC 
TCAAATACGG CGGGTATTTC GGTAAGCTCA CAAGGTGAGA CTCGTGTTGA TAGTAGCAGT
TTTGCTCGTA AAATTGCGAT CGAAAATATT GATGCGCGCC GTGTAGGTGA TTTAATTCAA
GGCTCTGCAT TGATTGTGAG TAAAACCTCT AGCGATATGC GCGTGCAGTA TAAATTCACT
TGGTACGATG CCAGCGGCTT TACTATTGAA GATGAGGCAA CAAGCTGGAA ATCGGTGAAA
TTGCACGGTA AACAGCAATT GCAGGTGTCG GCTGTGGCGC CGAACGCCCA AGTGGTGAAA
TTTGACGTTT ATGTGCGCGA GACCTATTCA AATTAG
 
Protein sequence
MKHIYTGLIM AAALTLGACA SNTAGISVSS QGETRVDSSS FARKIAIENI DARRVGDLIQ 
GSALIVSKTS SDMRVQYKFT WYDASGFTIE DEATSWKSVK LHGKQQLQVS AVAPNAQVVK
FDVYVRETYS N