Gene Sputcn32_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1654 
Symbol 
ID5079402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1885896 
End bp1886252 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content46% 
IMG OID640498803 
Producthistidine triad (HIT) protein 
Protein accessionYP_001183178 
Protein GI146292754 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0399957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG AAACCATTTT CAGTAAAATT ATTCGTCGTG AAATTCCAGC GGATATTCTA 
TATCAAGATG AATTGGTTAC CGCTTTTAGA GACATTTCCC CTAAGGCGCC AACCCATATT 
TTGATTGTGC CAAATCATTT AATTCCAACG GCGAACAAGA TGAAAGCCTC CGATGAGCCG 
GCACTGGGTC GGATGATGAC GGTTGCTGCA AAATTAGCCG CTGAGGCTGG CATTGCGAAG 
GATGGTTATC GTCTGATTAT GAACTGCAAC AAGCATGGTG GACAGGAAGT GTACCATATT 
CATATTCACC TCGTGGGCGG AGAACCACTG GGTCCCATGT TGAGCCAAGG TCAATGA
 
Protein sequence
MAEETIFSKI IRREIPADIL YQDELVTAFR DISPKAPTHI LIVPNHLIPT ANKMKASDEP 
ALGRMMTVAA KLAAEAGIAK DGYRLIMNCN KHGGQEVYHI HIHLVGGEPL GPMLSQGQ