| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1653 |
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| Symbol | |
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| ID | 5079401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1883973 |
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| End bp | 1885751 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498802 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001183177 |
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| Protein GI | 146292753 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.283043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCATT ACCAGATAAT CCCCGTTGAT CCGAAAGCCC ATTTATTTGC GGTCACTATG
ACGGTATCTA AGCCCAACGC AGTGCAAATA TTCAGCCTAC CCGCTTGGCT GCCCGGCAGT
TATATGGTGC GAGACTTCGC CAAAAATATC ATTGAACTCA AGGCTCAGGA TGCAAACGGC
CAAGCACTTA AACTCACCCA ATTAGATAAG CAAACCTGGT CGGTTGACCA TAATAGCAAC
GAAATTATTC TGACTTATCA AGTGTATGCT TGGGATTTAT CGGTGCGCAC CGCACATTTG
GACATGACCC ACGGTTTCTT TAATGGCAGT AGCGTTTTTT TATCGGCACA CGGTTTTGAA
GATCAAACTC ACACTGTCGC TCTGTTGCCT CCCACAGAAT TAGCGTTAGG TGACTGGCGC
GTCGCGACCA GCATGAGCCG CACCAGTGGT GATGACTTTG ATTTTGGTCA ATTCAGTGCC
GAAAATTATG ATGAACTGAT CGATCATCCC GTAGAGATGG GATTATTTAC CCTAGGGAGT
TTCGATGCCT GTGGCGTGCG GCACGATATC GTACTCAATG GCCGCCATCG CGCTTGTATG
CCAAGACTTT GCCAAGACTT AAAGGCCATT TGTGAGTACC AAATTAACCT CTTTGGCACA
CCCGCACCCT TCAAACGTTA TTTGTTTATG ACCACAGTAT TAGACAATGG TTTTGGCGGT
TTAGAGCACA GAGCGTCTAC TGCATTAATG TGTTCTCGCA AGGATTTACC CCTTTCAATC
GATGCGCCCA TCAATAATGA CTATCGCACC TATTTATCTT TATGTAGCCA CGAGTATTTT
CACAGCTGGA ATGTGAAACG TATTAAACCA GAGTGCTTCC GCCCTTATCG ACTCGAAACA
GAAACCTACA CATCGCAACT GTGGGCCTAT GAAGGGATAA CCTCTTATTA CGATGATTTT
CTGACCTACA GAGCAGGACT TGTCGATAAA CAAAGCTATT TAGATATGCT GAGTGAAACC
TTCACTCGCG TTTACCGTAG TCCAGGGCGT TTTAAGCAAA GTATTAAAGA TTCAAGCTTT
AATGCGTGGA CTAAGTTTTA TAAACAGGAT GAAAATGCAC AAAACGCCAT CATCAGCTAT
TACACTAAAG GCGCACTGTT TGCTTTGTAT CTCGATTTAA CCTTAAGAAG CGAGACGCAA
GGTAAGCACA CTCTCGATGA TGTGATGACA ATTCTATGGC AAGAATATGC GCTGCAAAAC
CGTGGTACCA CAGATGATTG CCATCAAAAG ATTGTTGAGC GCTTACTCGG GCGTGATTGT
CACGACCTGT TCGCCTATTT AAATAACACC GACGACATTC CATTGGCTCC TTTACTTGCT
AAATTTGGCG TCGAACTTAC CCTTCGGGCC AGCCAAGGCG CGCAAGATGT AGGCGGGGTC
AAAGCCAAAG GTTATGAAAT AGCCTTTGGT GCTAAAACCC AAGCCGCACC AATCGGTTTA
AAAATAGTGA CTGTTACCCA AGGCAGCCCT GCCCATCTTG CAGGTTTAAG CGCAGGAGAT
GTATTAATTG CCGCGGACAA TCTTCAAGTC ACAGGGCAAT TTGAGGCACA GTTGCAACAG
TATCCACTTG GACAAACCTT ACCGTTACAT TGGTTTAGAC GGGATGAATT AATGATGGGG
GAGTTGACCA TCACACCAGC ACCAAAGGAT ACCGTCGCAC TATCGATTAT TGATGACACG
AAATTAGCCG CTTGGCTTGG CGTTGAAAAT AAGCCATAA
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| Protein sequence | MIHYQIIPVD PKAHLFAVTM TVSKPNAVQI FSLPAWLPGS YMVRDFAKNI IELKAQDANG
QALKLTQLDK QTWSVDHNSN EIILTYQVYA WDLSVRTAHL DMTHGFFNGS SVFLSAHGFE
DQTHTVALLP PTELALGDWR VATSMSRTSG DDFDFGQFSA ENYDELIDHP VEMGLFTLGS
FDACGVRHDI VLNGRHRACM PRLCQDLKAI CEYQINLFGT PAPFKRYLFM TTVLDNGFGG
LEHRASTALM CSRKDLPLSI DAPINNDYRT YLSLCSHEYF HSWNVKRIKP ECFRPYRLET
ETYTSQLWAY EGITSYYDDF LTYRAGLVDK QSYLDMLSET FTRVYRSPGR FKQSIKDSSF
NAWTKFYKQD ENAQNAIISY YTKGALFALY LDLTLRSETQ GKHTLDDVMT ILWQEYALQN
RGTTDDCHQK IVERLLGRDC HDLFAYLNNT DDIPLAPLLA KFGVELTLRA SQGAQDVGGV
KAKGYEIAFG AKTQAAPIGL KIVTVTQGSP AHLAGLSAGD VLIAADNLQV TGQFEAQLQQ
YPLGQTLPLH WFRRDELMMG ELTITPAPKD TVALSIIDDT KLAAWLGVEN KP
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