| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1647 |
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| Symbol | |
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| ID | 5079395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1878226 |
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| End bp | 1880139 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498796 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001183171 |
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| Protein GI | 146292747 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGATGCTCGT GCTGGGTACA ATGTTACTCA CTGGAGCCAA
GGTTTTTATG GGATTAGCGA TCAAGGTGAG GTGACAGTGT CGCCGGATCC TAAAAATCCT
GAATACAAGA TTGGCTTAAA TGAGCTAGCC AAAGACATGG TTAAAGCGGG GGTCGCTTTA
CCTGTACTAG TTCGTTTTCC GCAGATCCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAGAA GTATGAGTAT CAGGCGGACT ATTTGTTGGT TTACCCGATT
AAAGTTAACC AACAACAAAC TGTGGTGGAA GAGATCCTAG CGAGTCAGGC ATCAAAAGAA
GTTCCGCAAC TGGGTTTAGA AGCGGGCAGT AAGCCTGAAT TGATGGCTGT GCTCGCGATG
GCACAAAAAG CCAGTTCAGT GATTGTTTGT AATGGTTATA AAGATAACGA ATATATTCGC
TTAGCACTGA TTGGTGAAAA GTTAGGCCAC AAGGTCTATA TCGTTTTAGA GAAACTGTCT
GAGCTTAAGA TGGTATTAGC TGAATCTAAA CGTCTGGGCG TGACACCGCG TTTAGGTCTA
CGTGCGCGTT TAGCGTTCCA AGGCAAAGGC AAGTGGCAGG CGAGTGGCGG TGAAAAGTCG
AAATTTGGTT TATCTGCAGC GCAAATTTTA ACCGTGGTTG ACCAGTTAAA ACAAAACGAT
ATGCTGGATT CGTTGCAATT GCTGCATTTC CATTTAGGTT CGCAAATTGC CAATATTCGT
GATATTCGCC AAGGTGTAAG CGAAGCGGGT CGTTTCTACT GTGAATTACG TGAGTTGGGA
GCAAGCGTTA ATTGCTTCGA CGTGGGTGGT GGTTTAGCGG TGGATTACGA TGGTACTCGC
AGCCAAAGTA ATAATTCAAT GAATTATGGC CTCACCGAAT ACGCCAACAA TATCGTTAAT
GTATTGACTG ATATCTGTAA TGAATATGCG CAGCCTATGC CACGTATTAT TTCAGAGTCT
GGACGTTATT TAACGGCACA TCACGCCGTA TTGATCACGG ATGTGATCGG TACAGAGGCT
TACCAACCTG AAAATATTCA ACCGCCAGCG GAAGAGTCAC CCCAGTTATT GCACAACATG
TGGCATTCAT GGTCTGAGAT CAGCGGCCGT GCTGATCAAC GCGCTTTGAT TGAGATTTAT
CATGATAGCC AAAGTGACTT ACAAGAAGCG CAGTCACTGT TTGCTTTAGG TCAGTTAAGT
TTGGCTGAAC GTGCGTGGGC TGAGCAGGCC AATCTACGTG TTTGTCATGA AGTTCAAGGG
TTGTTGAGCA CTAAAAACCG TTATCACAGA CCGATTATTG ACGAACTCAA TGAAAAGTTG
GCTGATAAGT TCTTCGTAAA CTTCTCGCTA TTCCAGTCAT TACCAGATGC TTGGGGTATT
GATCAAGTGT TCCCTGTATT GCCGCTTTCG GGATTAGATA AAGCGCCAGA GCGCCGCGCT
GTGATGCTGG ATATTACCTG TGACTCTGAC GGTATTGTTG ATCAATATGT CGATGGTCAA
GGGATTGAAA CCACGCTACC AGTACCAGCA TGGAGCGCTG AAAGTCCATA TTTGATTGGT
TTCTTCCTTG TGGGAGCTTA TCAAGAAATT TTGGGTGATA TGCACAATCT TTTTGGTGAT
ACCAACTCCG CGGTAGTTCG GATTGAAGAG AATGGTGTCA CGAATATTGA ATCTGTGCTA
GCGGGTGATA CGGTTGCTGA CGTATTGCGT TACGTTAACT TAGATGCGGT GGCCTTTATG
CGCACTTACG AAGAGCTAGT GAATTTACAT ATTGAAGAAG ATGAACGCGC ACAAATTTTA
GAAGAACTAC AAGTTGGCCT TAAAGGTTAC ACTTATTTAG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDDAR AGYNVTHWSQ GFYGISDQGE VTVSPDPKNP EYKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQQTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVTPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL TVVDQLKQND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAG RFYCELRELG ASVNCFDVGG GLAVDYDGTR
SQSNNSMNYG LTEYANNIVN VLTDICNEYA QPMPRIISES GRYLTAHHAV LITDVIGTEA
YQPENIQPPA EESPQLLHNM WHSWSEISGR ADQRALIEIY HDSQSDLQEA QSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSTKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSAESPYLIG
FFLVGAYQEI LGDMHNLFGD TNSAVVRIEE NGVTNIESVL AGDTVADVLR YVNLDAVAFM
RTYEELVNLH IEEDERAQIL EELQVGLKGY TYLEDFS
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