| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1642 |
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| Symbol | |
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| ID | 5079390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1873595 |
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| End bp | 1874521 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498791 |
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| Product | ABC transporter related |
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| Protein accession | YP_001183166 |
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| Protein GI | 146292742 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00844741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGA TCCAATGCCA AGGCTTATCT AAATCCTACG GAAGCAAACA AGCCTTAAAT
GATGTCAGCT TTAACCTTGA AGCGGGCGCC CCCATTGCCC TTGTTGGCCC TAATGGTGCA
GGTAAAACCA CGCTATTTAG TTTACTATGC GGCTATTTAT CCCCAAGCGC TGGCACAATA
ACCTTGCTGG GTGAAGCCCC CAATAGTCCC AAACTCTTAG GTAAAATAGC AGCATTACCT
CAGGATGCTG CACTCGATCC CAACCTCACT ATTGCAAGTC AATTGGCTTT TTTCGCCCGT
TTACAGGGGA TGAATGCTCA TGTTGCAGCG AAAGAAGCAT TACGAGTACT GACCTTAGTA
GATTTGGCTG AAGTGGCTCA GCAAAAGCCT CCTAGCCTAA GCCATGGCAT GAGTAAACGT
GTCGCCATTG CCCAAGCCTT GATTGGCTCA CCGCAACTAG TGCTACTGGA TGAACCGACG
GCAGGACTCG ATCCCGCTAA TGCTAAAAAA GTGCGAGAAC TGGTAAAAGC ACTGTCAACT
ACGACAACCT TTATGATCAG TTCCCATAAT CTTGATGAAT TAGAAAAACT TTGCGATCAA
GTGTTGTATC TCGACAAAGG TGAATTAAGT CAATCTGTCT CAATGCGCGC CTCCACCGAT
AGTGACTATC TCACATTAAC GATGCAAAAC TGTGACAGTG AAAAATTACT GCAGGAAATA
GCAAAACTCA GTGGTGTGAT CAATATCAGT TCTAAGCAAA CTAATGTGTT TATTATTCAG
CTAGACAATA AAGATAAGTA TAAAGAGGAA AATTTCCCGA CTCATTATGA TGTTGAAATC
GCATTACTTT CACTTTTAGA CTCCCATCAA TGGCAATATA AAATGCTTCT AAGAGGTCGA
ACCCTAGAAG AAACGCTGTT CTCCTAA
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| Protein sequence | MSLIQCQGLS KSYGSKQALN DVSFNLEAGA PIALVGPNGA GKTTLFSLLC GYLSPSAGTI
TLLGEAPNSP KLLGKIAALP QDAALDPNLT IASQLAFFAR LQGMNAHVAA KEALRVLTLV
DLAEVAQQKP PSLSHGMSKR VAIAQALIGS PQLVLLDEPT AGLDPANAKK VRELVKALST
TTTFMISSHN LDELEKLCDQ VLYLDKGELS QSVSMRASTD SDYLTLTMQN CDSEKLLQEI
AKLSGVINIS SKQTNVFIIQ LDNKDKYKEE NFPTHYDVEI ALLSLLDSHQ WQYKMLLRGR
TLEETLFS
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